RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 KRT76Q01546 638 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 ZC2HC1CQ53FD0 456 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 TBCELQ5QJ74 424 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 OTOAQ7RTW8 1153 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 HAUS6Q7Z4H7 955 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 HDAC7Q8WUI4 952 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 OXNAD1Q96HP4 312 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 FUCA2Q9BTY2 467 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 RAVER2Q9HCJ3 691 aaKnown RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 PSMD3O43242 534 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 CST8O60676 142 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 BBS7Q8IWZ6 715 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 ATXN2LQ8WWM7 1075 aaKnown RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 RBBP8Q99708 897 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 KCTD14Q9BQ13 255 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 RARGP13631 454 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 ITGB3BPQ13352 177 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 C11orf63Q6NUN7 778 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 LRRC8DQ7L1W4 858 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 THUMPD3Q9BV44 507 aaKnown RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 DMGDHQ9UI17 866 aaKnown RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 R3HDM2Q9Y2K5 976 aaKnown RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 FAM25AB3EWG3 89 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 FAM25CB3EWG5 89 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 FAM25GB3EWG6 89 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 FGFR3P22607 806 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 BAG6P46379 1132 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 IL5RAQ01344 420 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF618Q5T7W0 954 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 ST13P5Q8NFI4 369 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 MRPL4Q9BYD3 311 aaKnown RBP16.77■□□□□ 0.28
SHANK1-204ENST00000391814 SLC8A2Q9UPR5 921 aa16.77■□□□□ 0.28
SHANK1-204ENST00000391814 TRIM13O60858 407 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 BFSP2Q13515 415 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 ASAP3Q8TDY4 903 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 GALNTL6Q49A17 601 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 TRIM65Q6PJ69 517 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 DENND5BQ6ZUT9 1274 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.27
SHANK1-204ENST00000391814 SH3KBP1Q96B97 665 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 ERGIC2Q96RQ1 377 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TRPM1Q7Z4N2 1603 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 EEF2KO00418 725 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TM9SF1O15321 606 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 C4BPBP20851 252 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 CHN2P52757 468 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 IFI35P80217 286 aaPredicted RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 NR1D2Q14995 579 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 SKIV2LQ15477 1246 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TSEN2Q8NCE0 465 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 RDM1Q8NG50 284 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 PYDC1Q8WXC3 89 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 GUCA1CO95843 209 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 CACNB2Q08289 660 aaPredicted RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TMPRSS6Q8IU80 811 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TRPC7Q9HCX4 862 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 NAALADL1Q9UQQ1 740 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 IGKV5-2P06315 115 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 MMRN1Q13201 1228 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 NFIL3Q16649 462 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 CATSPER4Q7RTX7 472 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 ZSCAN18Q8TBC5 510 aaPredicted RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 EURLQ9NYK6 297 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 ARMCX1Q9P291 453 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 STX7O15400 261 aaKnown RBP16.76■□□□□ 0.27
SHANK1-204ENST00000391814 PDGFRAP16234 1089 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 PTPN7P35236 360 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 NFYCQ13952 458 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 C19orf60Q96EN9 201 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 PLEKHG4BQ96PX9 1271 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 EPS8L2Q9H6S3 715 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 TUFT1Q9NNX1 390 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 GDF3Q9NR23 364 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 MRGBPQ9NV56 204 aa16.76■□□□□ 0.27
SHANK1-204ENST00000391814 ADCY6O43306 1168 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CLASP2O75122 1294 aaKnown RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ZNF235Q14590 738 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 DGUOKQ16854 277 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 FANCEQ9HB96 536 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 VTA1Q9NP79 307 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PKP3Q9Y446 797 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 UGP2Q16851 508 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PDZK1Q5T2W1 519 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ZNF554Q86TJ5 538 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 GINS4Q9BRT9 223 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 TRIM39Q9HCM9 518 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms