RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ANKRD6Q9Y2G4 727 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 MRPS17Q9Y2R5 130 aaKnown RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 PLEKHM1Q9Y4G2 1056 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 ANKRD62A6NC57 917 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 SMIM22K7EJ46 135 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 TLR5O60602 858 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 OFD1O75665 1012 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 ALDH1L1O75891 902 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 CSF1RP07333 972 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 ENGP17813 658 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 VIPR2P41587 438 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 KCNJ5P48544 419 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 ATXN1P54253 815 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 UCP3P55916 312 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 EEFSECP57772 596 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 CYP4F2P78329 520 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 TTF1Q15361 905 aaPredicted RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 ZIK1Q3SY52 487 aaPredicted RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 AARS2Q5JTZ9 985 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 SFRP4Q6FHJ7 346 aaPredicted RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 ANKRD16Q6P6B7 361 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 SLC29A4Q7RTT9 530 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 ZNF280BQ86YH2 543 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 PPP1R35Q8TAP8 253 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 SCARB1Q8WTV0 552 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 R3HDM4Q96D70 268 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 MTFMTQ96DP5 389 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 C1GALT1C1Q96EU7 318 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 CXorf36Q9H7Y0 433 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 SARS2Q9NP81 518 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 DUSP22Q9NRW4 184 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 XPR1Q9UBH6 696 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 GABBR1Q9UBS5 961 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 NDRG4Q9ULP0 352 aaKnown RBP4.27□□□□□ -1.73
TRAV40-201ENST00000390467 MED16Q9Y2X0 877 aa4.27□□□□□ -1.73
TRAV40-201ENST00000390467 A1L4Q6 167 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 AP1G1O43747 822 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 FAM163BP0C2L3 166 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 PRR35P0CG20 571 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 NPR1P16066 1061 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 VCAM1P19320 739 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 EPHB2P29323 1055 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 ALDH9A1P49189 494 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 SLC11A2P49281 568 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 SSBP2P81877 361 aaPredicted RBP4.26□□□□□ -1.73
TRAV40-201ENST00000390467 GRM1Q13255 1194 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 KLF9Q13886 244 aaPredicted RBP4.26□□□□□ -1.73
TRAV40-201ENST00000390467 SRSF7Q16629 238 aaKnown RBP eCLIP4.26□□□□□ -1.73
TRAV40-201ENST00000390467 ZNF626Q68DY1 528 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 B3GNT9Q6UX72 402 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 NAPRTQ6XQN6 538 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 DENND1CQ8IV53 801 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 LRRC71Q8N4P6 559 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 FANCBQ8NB91 859 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 FSD1LQ9BXM9 530 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 GLOD4Q9HC38 313 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 SH2B3Q9UQQ2 575 aa4.26□□□□□ -1.73
TRAV40-201ENST00000390467 A0A088AWK7 358 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 QSOX1O00391 747 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 TP73O15350 636 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 AKAP10O43572 662 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 JTBO76095 146 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 UBXN7O94888 489 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 PDGFRBP09619 1106 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 CT47B1P0C2W7 299 aaPredicted RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 MYBP10242 640 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 NCLP19338 710 aaKnown RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 HTR1BP28222 390 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ADORA2AP29274 412 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 CTGFP29279 349 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 MPGP29372 298 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 MYO1EQ12965 1108 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 MTX3Q5HYI7 312 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 PCID2Q5JVF3 399 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 DEPDC1Q5TB30 811 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 PRAMEF17Q5VTA0 474 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ZNF425Q6IV72 752 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ZNF804AQ7Z570 1209 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 WDR53Q7Z5U6 358 aaPredicted RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 TPH2Q8IWU9 490 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 JPH3Q8WXH2 748 aaPredicted RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 NAF1Q96HR8 494 aaKnown RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 LRGUKQ96M69 825 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 TAAR9Q96RI9 348 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ACO2Q99798 780 aaKnown RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 SH2D3AQ9BRG2 576 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 TRIM54Q9BYV2 358 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ANLNQ9NQW6 1124 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 TYW1Q9NV66 732 aaKnown RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 DDX56Q9NY93 547 aaKnown RBP4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ADAMTS5Q9UNA0 930 aa4.25□□□□□ -1.73
TRAV40-201ENST00000390467 ZNF804BA4D1E1 1349 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 A0A087WWL8 130 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 H3BML4 177 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 VNN1O95497 513 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 ONECUT2O95948 504 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 IBSPP21815 317 aaPredicted RBP4.24□□□□□ -1.73
TRAV40-201ENST00000390467 RAB27AP51159 221 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 ARFIP2P53365 341 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms