RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 ZMYM5Q9UJ78 669 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 GMEB2Q9UKD1 530 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 GTF3C4Q9UKN8 822 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 MAGED2Q9UNF1 606 aaPredicted RBP11.86□□□□□ -0.51
TRAV3-201ENST00000390425 NME7Q9Y5B8 376 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 SNX9Q9Y5X1 595 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 ABCA7Q8IZY2 2146 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 ATP2C2O75185 946 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 KRT19P08727 400 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 TMEM191BP0C7N4 346 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 CSH1P0DML2 217 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 CSH2P0DML3 217 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 DDX6P26196 483 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 ATXN1P54253 815 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 MYL7Q01449 175 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 LMNB2Q03252 620 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 USP4Q13107 963 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 SIM2Q14190 667 aaPredicted RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 CFAP221Q4G0U5 840 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 TMEM196Q5HYL7 178 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 HEATR6Q6AI08 1181 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 PRR23BQ6ZRT6 265 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 LONP2Q86WA8 852 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 SPATA18Q8TC71 538 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 CACTINQ8WUQ7 758 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 MRPS31Q92665 395 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 MYRFLQ96LU7 910 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 EBF3Q9H4W6 596 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 KIF9Q9HAQ2 790 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 FBRSL1Q9HCM7 1045 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 TDP1Q9NUW8 608 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 KBTBD4Q9NVX7 518 aa11.85□□□□□ -0.51
TRAV3-201ENST00000390425 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.85□□□□□ -0.51
TRAV3-201ENST00000390425 STX6O43752 255 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 RETP07949 1114 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 HOXA6P31267 233 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 AVPR1AP37288 418 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 RBP5P82980 135 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 RUNX3Q13761 415 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 ZNF268Q14587 947 aaPredicted RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 MTF1Q14872 753 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 STK38Q15208 465 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 ZNF77Q15935 545 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 FAM171BQ6P995 826 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 SYNPOQ8N3V7 929 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 EZH1Q92800 747 aaPredicted RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 MYLPFQ96A32 169 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 TRIM9Q9C026 710 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 TNMDQ9H2S6 317 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 TMEM206Q9H813 350 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 CRTAC1Q9NQ79 661 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 POLR3BQ9NW08 1133 aaPredicted RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 THG1LQ9NWX6 298 aaKnown RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 RAB23Q9ULC3 237 aa11.84□□□□□ -0.51
TRAV3-201ENST00000390425 KMT2BQ9UMN6 2715 aaPredicted RBP11.84□□□□□ -0.51
TRAV3-201ENST00000390425 LAMA1P25391 3075 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 THADAQ6YHU6 1953 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 PRR5-ARHGAP8B1AHC4 643 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 K7ELQ4 463 aaPredicted RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 TRDMT1O14717 391 aaKnown RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 KIAA0391O15091 583 aaKnown RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 TGFB1I1O43294 461 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 PPP6R2O75170 966 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 EGFP01133 1207 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 LMO2P25791 158 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 PCSK1P29120 753 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 MAGEA11P43364 429 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 LHX1P48742 406 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 RPL10AP62906 217 aaKnown RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 ARHGAP8P85298 464 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 FAM160A1Q05DH4 1040 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 EHHADHQ08426 723 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 WDR5BQ86VZ2 330 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 SPATA2LQ8IUW3 424 aaPredicted RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 HPDLQ96IR7 371 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 ANKRD36BP1Q96IX9 119 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 CYP2S1Q96SQ9 504 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 SYT15Q9BQS2 421 aa11.83□□□□□ -0.52
TRAV3-201ENST00000390425 ZSCAN16Q9H4T2 348 aaPredicted RBP11.83□□□□□ -0.52
TRAV3-201ENST00000390425 UXTQ9UBK9 157 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms