RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 C20orf96Q9NUD7 363 aaPredicted RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 NUDT2P50583 147 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 PPATQ06203 517 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 MORF4L2Q15014 288 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 RNF169Q8NCN4 708 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 TMEM150BA6NC51 233 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 KDM1AO60341 852 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 PPP1R11O60927 126 aaPredicted RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 GJB6O95452 261 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 SOX11P35716 441 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 KCTD21Q4G0X4 260 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 ZNF677Q86XU0 584 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 TRAPPC9Q96Q05 1148 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 CCDC68Q9H2F9 335 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 CCDC134Q9H6E4 229 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 M0QYV0 167 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 GNGT2O14610 69 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 TAC1P20366 129 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 RPS6KA3P51812 740 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 OCA2Q04671 838 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 SLC12A1Q13621 1099 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 PIGHQ14442 188 aaPredicted RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 ACER1Q8TDN7 264 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 GCNAQ96QF7 691 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 AJAP1Q9UKB5 411 aaPredicted RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 MEIS2O14770 477 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 OASLQ15646 514 aaKnown RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 TTC39BQ5VTQ0 682 aaPredicted RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 FAM160B1Q5W0V3 765 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 EGFL6Q8IUX8 553 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 NIM1KQ8IY84 436 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 MRPL1Q9BYD6 325 aaKnown RBP14.87□□□□□ -0.03
RTF1-201ENST00000389629 EBF2Q9HAK2 575 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 SLC38A10Q9HBR0 1119 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 SLC24A2Q9UI40 661 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 RGPD2P0DJD1 1756 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 ANKRD63C9JTQ0 380 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 KIF19Q2TAC6 998 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 CCNJLQ8IV13 435 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 EXD1Q8NHP7 514 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 C10orf88Q9H8K7 445 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 SLC5A4Q9NY91 659 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 DNPEPQ9ULA0 475 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 FAM237BA0A1B0GVD1 139 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 PARP6Q2NL67 630 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 HYIQ5T013 277 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 GPAT2Q6NUI2 795 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 DEFB107AQ8IZN7 70 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 UCMAQ8WVF2 138 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 TIPINQ9BVW5 301 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 CCDC90BQ9GZT6 254 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 LRMDAQ9H2I8 198 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 TMEM165Q9HC07 324 aa14.87□□□□□ -0.03
RTF1-201ENST00000389629 CNTNAP4Q9C0A0 1308 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 A8MXQ7 604 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 HNRNPRO43390 633 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 FKBP6O75344 327 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 ETS1P14921 441 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 CDK16Q00536 496 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 TAP1Q03518 808 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 SEZ6Q53EL9 994 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 EXT2Q93063 718 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 LRRC19Q9H756 370 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 TMEM59LQ9UK28 342 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 CAMTA1Q9Y6Y1 1673 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 DNALI1O14645 258 aaPredicted RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 SKIV2L2P42285 1042 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 OTOAQ7RTW8 1153 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 GRIP2Q9C0E4 1043 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 HERC5Q9UII4 1024 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 DNAJC16Q9Y2G8 782 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 FRMPD4Q14CM0 1322 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 RPTORQ8N122 1335 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 MAP4P27816 1152 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 NPTX2P47972 431 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 ADARP55265 1226 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 OTUD4Q01804 1114 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 POTEAQ6S8J7 498 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 SLFN11Q7Z7L1 901 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 RYBPQ8N488 228 aaPredicted RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 RPF1Q9H9Y2 349 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 RNF146Q9NTX7 359 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 AKAP10O43572 662 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 MMP10P09238 476 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 SERPINB5P36952 375 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 SOX10P56693 466 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 PPIDQ08752 370 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 CUL2Q13617 745 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 KHDC1Q4VXA5 237 aaKnown RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 ZCCHC23Q6ZST2 131 aa14.86□□□□□ -0.03
RTF1-201ENST00000389629 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 GABPB2Q8TAK5 448 aaPredicted RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 DMAP1Q9NPF5 467 aaPredicted RBP14.86□□□□□ -0.03
RTF1-201ENST00000389629 CCDC78A2IDD5 438 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 H0YGN5 161 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 BANF1O75531 89 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms