RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PABPN1LA6NDY0 278 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZBBXA8MT70 800 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 H0YGN5 161 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 MEIS2O14770 477 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 CDK16Q00536 496 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 IL1RL1Q01638 556 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF317Q96PQ6 595 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 SCAF8Q9UPN6 1271 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 R3HDM2Q9Y2K5 976 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 NFS1Q9Y697 457 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 EXTL3O43909 919 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 GSTT1P30711 240 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 ACTR2P61160 394 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 BAATQ14032 418 aaPredicted RBP13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZDHHC24Q6UX98 284 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 PID1Q7Z2X4 250 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 PYDC1Q8WXC3 89 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 PGBD4Q96DM1 585 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 DDX18Q9NVP1 670 aaKnown RBP13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 TRPC5Q9UL62 973 aaPredicted RBP13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZC3H4Q9UPT8 1303 aaKnown RBP13.71□□□□□ -0.22
TRAPPC9-201ENST00000389328 FSCN2O14926 492 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 EDF1O60869 148 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 NUDT2P50583 147 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 CYP24A1Q07973 514 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC12A1Q13621 1099 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 KIF19Q2TAC6 998 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 CCT7Q99832 543 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 TMEM59LQ9UK28 342 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SKIV2L2P42285 1042 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RARRES1P49788 294 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RPL10AP62906 217 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 MYBPC2Q14324 1141 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SPRED3Q2MJR0 410 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 TRABD2AQ86V40 505 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC26A11Q86WA9 606 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RNF135Q8IUD6 432 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SDCCAG3Q96C92 435 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 THAP11Q96EK4 314 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZDHHC18Q9NUE0 388 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 BFARQ9NZS9 450 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 WARS2Q9UGM6 360 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 FRMPD4Q14CM0 1322 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 BCL9O00512 1426 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 PPP1R11O60927 126 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 EEF1DP29692 281 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 FLOT2Q14254 428 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 TCHHL1Q5QJ38 904 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 CPNE8Q86YQ8 564 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RNF149Q8NC42 400 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 PPP2R3CQ969Q6 453 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 OPTNQ96CV9 577 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SRPK1Q96SB4 655 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 EME2A4GXA9 379 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 CLPTM1O96005 669 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 ETS2P15036 469 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 RHBDL3P58872 404 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SPP2Q13103 211 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 LRRC8EQ6NSJ5 796 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■■ 122.8
TRAPPC9-201ENST00000389328 UBA3Q8TBC4 463 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 TAAR1Q96RJ0 339 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 MRPL4Q9BYD3 311 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 LRMDAQ9H2I8 198 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 LRRC4Q9HBW1 653 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 HERC5Q9UII4 1024 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 AURKCQ9UQB9 309 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 ACTL7BQ9Y614 415 aa13.7□□□□□ -0.22
TRAPPC9-201ENST00000389328 MYH8P13535 1937 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 KBTBD13C9JR72 458 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 F8VP50 259 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 CYP1A2P05177 515 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 PTGIRP43119 386 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 SERPINB9P50453 376 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 PRKCEQ02156 737 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 DEFB107AQ8IZN7 70 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms