RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 TOB1P50616 345 aaPredicted RBP23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 SLC12A3P55017 1021 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 LMAN2Q12907 356 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 UAP1L1Q3KQV9 507 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 WSCD1Q658N2 575 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 RASSF3Q86WH2 238 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 ASB7Q9H672 318 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 TMEM206Q9H813 350 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 EVLQ9UI08 416 aaPredicted RBP23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 NEUROG3Q9Y4Z2 214 aa23.04■■□□□ 1.28
CNEP1R1-201ENST00000389134 PATE3B3GLJ2 98 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 PLA2G4BP0C869 781 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 ZNF77Q15935 545 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 NFE2Q16621 373 aaPredicted RBP23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 DEFB124Q8NES8 71 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 CNOT6LQ96LI5 555 aaKnown RBP23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 PNMA5Q96PV4 448 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 TPSD1Q9BZJ3 242 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 SLC32A1Q9H598 525 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 C2CD2Q9Y426 696 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 ADAMTS9Q9P2N4 1935 aa23.03■■□□□ 1.28
CNEP1R1-201ENST00000389134 PRPF40AO75400 957 aaKnown RBP23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 USP17L7P0C7H9 530 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 DHPSP49366 369 aaPredicted RBP23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 HMGN5P82970 282 aaKnown RBP23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 TSPY1Q01534 308 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 EML3Q32P44 896 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 USP33Q8TEY7 942 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 PIGKQ92643 395 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 DPP3Q9NY33 737 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 ODF2LQ9ULJ1 636 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 LHX6Q9UPM6 363 aa23.02■■□□□ 1.28
CNEP1R1-201ENST00000389134 FREM2Q5SZK8 3169 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 TRAV19A0A0A6YYK7 116 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 NPHP3-ACAD11A0A0J9YXS1 232 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 BCKDHBP21953 392 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 RPL10AP62906 217 aaKnown RBP23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 RING1Q06587 406 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 USP4Q13107 963 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 ANO7Q6IWH7 933 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 CCDC83Q8IWF9 413 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 FAM184AQ8NB25 1140 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 TRMT2BQ96GJ1 504 aaKnown RBP23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 MYRFLQ96LU7 910 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 PI4K2AQ9BTU6 479 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 NUSAP1Q9BXS6 441 aaKnown RBP23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 TMLHEQ9NVH6 421 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 MSRB2Q9Y3D2 182 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 WNT6Q9Y6F9 365 aa23.01■■□□□ 1.27
CNEP1R1-201ENST00000389134 ACACAQ13085 2346 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 KPNA7A9QM74 516 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 CKMP06732 381 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 GPR15P49685 360 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 TRIM61Q5EBN2 209 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 ARSHQ5FYA8 562 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 TTC16Q8NEE8 873 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 LEO1Q8WVC0 666 aaPredicted RBP23■■□□□ 1.27
CNEP1R1-201ENST00000389134 CDK5RAP3Q96JB5 506 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 CYP2S1Q96SQ9 504 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 PLIN2Q99541 437 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 TRPC7Q9HCX4 862 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 ABCB6Q9NP58 842 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 MMP17Q9ULZ9 603 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 LIMCH1Q9UPQ0 1083 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 ADAMTS20P59510 1910 aa23■■□□□ 1.27
CNEP1R1-201ENST00000389134 ITPR1Q14643 2758 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 K7ENM7 598 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 TADA3O75528 432 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 ALDH1A2O94788 518 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 NOL4O94818 638 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 ABCD1P33897 745 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 ACOT2P49753 483 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 SV2CQ496J9 727 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 C2orf27AQ580R0 203 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 SDHAF4Q5VUM1 108 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 KIAA1211LQ6NV74 962 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 SLC39A4Q6P5W5 647 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 EFCAB13Q8IY85 973 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 MYCT1Q8N699 235 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 STKLD1Q8NE28 680 aa22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.99■■□□□ 1.27
CNEP1R1-201ENST00000389134 LAMA5O15230 3695 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 K7EQS6 105 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 TNFRSF10BO14763 440 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 HYAL3O43820 417 aaPredicted RBP22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 NFATC1O95644 943 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 TCF3P15923 654 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 POU5F1Q01860 360 aaKnown RBP22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 CRY1Q16526 586 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 DDR2Q16832 855 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 LPCAT2Q7L5N7 544 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 FSIP1Q8NA03 581 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 MDGA1Q8NFP4 955 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 ZNF560Q96MR9 790 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 SLC22A12Q96S37 553 aa22.98■■□□□ 1.27
CNEP1R1-201ENST00000389134 DPP6P42658 865 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 SEC13P55735 322 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 SLFN12LQ6IEE8 588 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 OLIG1Q8TAK6 271 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 SH3RF2Q8TEC5 729 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms