RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 UBE2R2Q712K3 238 aaPredicted RBP1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 DAAM2Q86T65 1068 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 KIF18BQ86Y91 864 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 LRRC71Q8N4P6 559 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 IQCF1Q8N6M8 205 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 LMO3Q8TAP4 145 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 CCHCR1Q8TD31 782 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 SLC25A28Q96A46 364 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 EGLN1Q9GZT9 426 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 RMI1Q9H9A7 625 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 SPTLC3Q9NUV7 552 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 JKAMPQ9P055 326 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 PCDHA7Q9UN72 937 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 PTCH2Q9Y6C5 1203 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 EVPLQ92817 2033 aa1.37□□□□□ -2.19
RNU6-880P-201ENST00000384526 SLC16A3O15427 465 aaKnown RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 FESP07332 822 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 FPR3P25089 353 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 ERCC5P28715 1186 aaPredicted RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 CDC25AP30304 524 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 FLT3P36888 993 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 ENTPD1P49961 510 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 ALDH5A1P51649 535 aaPredicted RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 ERVFC1-1P60608 527 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 MGAT2Q10469 447 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 FSCN1Q16658 493 aaKnown RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 PRTGQ2VWP7 1150 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 ODF3L2Q3SX64 289 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 TAF2Q6P1X5 1199 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 PDXDC1Q6P996 788 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 Q6ZWC4 215 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 RTL10Q7L3V2 364 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 DTX2Q86UW9 622 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 MYPOPQ86VE0 399 aaPredicted RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 SMC1BQ8NDV3 1235 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 PSD4Q8NDX1 1056 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 SLC17A8Q8NDX2 589 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 OR2I1PQ8NGU4 316 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 CTCFLQ8NI51 663 aaPredicted RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 RP9Q8TA86 221 aaKnown RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 WIPF2Q8TF74 440 aaPredicted RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 CYFIP2Q96F07 1278 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 RNPC3Q96LT9 517 aaKnown RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 SMOQ99835 787 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 CIPCQ9C0C6 399 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 MRPS18AQ9NVS2 196 aaKnown RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 IFT57Q9NWB7 429 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 ASIC5Q9NY37 505 aa1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 KIAA1522Q9P206 1035 aaPredicted RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 MYBBP1AQ9BQG0 1328 aaKnown RBP1.36□□□□□ -2.19
RNU6-880P-201ENST00000384526 FNDC1Q4ZHG4 1894 aaPredicted RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 IGKV3D-20A0A0C4DH25 116 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 POLRMTO00411 1230 aaKnown RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 SPTLC2O15270 562 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 KPNA6O60684 536 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 PAPSS2O95340 614 aaPredicted RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 MTHFD1P11586 935 aaKnown RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 CHRM3P20309 590 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 VEGFCP49767 419 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 CTXN1P60606 82 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 RPS13P62277 151 aaKnown RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 GPSM2P81274 684 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 SP2Q02086 613 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 UGT8Q16880 541 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 FNDC3BQ53EP0 1204 aaKnown RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 AWAT1Q58HT5 328 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 RNASE12Q5GAN4 147 aaKnown RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 MUM1L1Q5H9M0 696 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 TMTC4Q5T4D3 741 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 ZNF449Q6P9G9 518 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 FAM180AQ6UWF9 173 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 SLC30A10Q6XR72 485 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 PARS2Q7L3T8 475 aaKnown RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 GPR101Q96P66 508 aaPredicted RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 LENG8Q96PV6 779 aaPredicted RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 GMLQ99445 158 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 KCNG1Q9UIX4 513 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 SMAD5-AS1Q9Y6J3 95 aa1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 TTBK1Q5TCY1 1321 aaPredicted RBP1.35□□□□□ -2.19
RNU6-880P-201ENST00000384526 PRR23AA6NEV1 266 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 SRRM3A6NNA2 597 aaPredicted RBP1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 PODXLO00592 558 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 TLR5O60602 858 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 SLC43A1O75387 559 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 RNF8O76064 485 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 SP1P08047 785 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 GM2AP17900 193 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 ITGALP20701 1170 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 ENPP1P22413 925 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 ATP2B3Q16720 1220 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 MUM1Q2TAK8 710 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 PABPC1LQ4VXU2 614 aaKnown RBP1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 BROXQ5VW32 411 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 MEX3BQ6ZN04 569 aaKnown RBP1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 RFX8Q6ZV50 586 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 SFTPA1Q8IWL2 248 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 CKAP2LQ8IYA6 745 aa1.34□□□□□ -2.19
RNU6-880P-201ENST00000384526 MRRFQ96E11 262 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms