RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 RABEP1Q15276 862 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ZNF260Q3ZCT1 412 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ARHGAP40Q5TG30 622 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TRIM72Q6ZMU5 477 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ZNF517Q6ZMY9 492 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 HEATR3Q7Z4Q2 680 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PPP1R3BQ86XI6 285 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CPA6Q8N4T0 437 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 C8orf58Q8NAV2 365 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ATG4AQ8WYN0 398 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 DDX17Q92841 729 aaKnown RBP3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 RITA1Q96K30 269 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ASB2Q96Q27 587 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TMX1Q9H3N1 280 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ADAMTS5Q9UNA0 930 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SSX2IPQ9Y2D8 614 aa3.33□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CYP2D7A0A087X1C5 515 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KATNA1O75449 491 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 FTLP02792 175 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PXNP49023 591 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 HK3P52790 923 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 POLGP54098 1239 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PDE1AP54750 535 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LILRA4P59901 499 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 HOXA4Q00056 320 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PTPN21Q16825 1174 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LONRF3Q496Y0 759 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 Q4G0T1 1027 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 THEMIS2Q5TEJ8 643 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KIRREL2Q6UWL6 708 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LAYNQ6UX15 382 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 MIER2Q8N344 545 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GLG1Q92896 1179 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 R3HDM4Q96D70 268 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 HMCESQ96FZ2 354 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 BRIP1Q9BX63 1249 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TRNAU1APQ9NX07 287 aaKnown RBP3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KLHL13Q9P2N7 655 aa3.32□□□□□ -1.88
RNU6-1040P-201ENST00000383974 WDR17Q8IZU2 1322 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 A1L4Q6 167 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 E5RJQ4 531 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 H7C1Q1 480 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SLC16A6O15403 523 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 DTNBO60941 627 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 BCAR3O75815 825 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PDE8BO95263 885 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ATXN1LP0C7T5 689 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TYRP14679 529 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CDKN1CP49918 316 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PLCD1P51178 756 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 EXOSC9Q06265 439 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LAMB3Q13751 1172 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LRRC41Q15345 812 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KLHL22Q53GT1 634 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PXDC1Q5TGL8 231 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 EGFLAMQ63HQ2 1017 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 FCRL6Q6DN72 434 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 RGS7BPQ6MZT1 257 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 MIS18BP1Q6P0N0 1132 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PARS2Q7L3T8 475 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KRT73Q86Y46 540 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PCSK9Q8NBP7 692 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 RP9Q8TA86 221 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 XAGE5Q8WWM1 108 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 DAZAP1Q96EP5 407 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ZC3H10Q96K80 434 aaKnown RBP3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SLC13A1Q9BZW2 595 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GLOD4Q9HC38 313 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LMBRD1Q9NUN5 540 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 AFG3L2Q9Y4W6 797 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PCDHA1Q9Y5I3 950 aa3.31□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TNKSO95271 1327 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ERC2O15083 957 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 USP1O94782 785 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 UNC5CO95185 931 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PDCP20941 246 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 MAP2K6P52564 334 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TPTEP56180 551 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GTF2H3Q13889 308 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 RAPGEF1Q13905 1077 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 FAM50AQ14320 339 aaKnown RBP3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 IQCB1Q15051 598 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TRIP6Q15654 476 aaKnown RBP3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GPR162Q16538 588 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CERKLQ49MI3 558 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 RUSC1-AS1Q66K80 236 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 Q6ZWC4 215 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PTDSS2Q9BVG9 487 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SPC25Q9HBM1 224 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ZNF580Q9UK33 172 aa3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CCNL1Q9UK58 526 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 NDRG4Q9ULP0 352 aaKnown RBP3.3□□□□□ -1.88
RNU6-1040P-201ENST00000383974 POC1B-GALNT4F8VUJ3 575 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SOCS2O14508 198 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 INSIG1O15503 277 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 EXOC3O60645 756 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TJP3O95049 919 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CYP2A6P11509 494 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms