RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FOXN2P32314 431 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PAPOLAP51003 745 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 RNASELQ05823 741 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PDK4Q16654 411 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 SLC45A4Q5BKX6 768 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TRIM68Q6AZZ1 485 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ZBTB8OSQ8IWT0 167 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 HELQQ8TDG4 1101 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 DNAJC9Q8WXX5 260 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ZBTB45Q96K62 511 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 CFAP57Q96MR6 1250 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TTC25Q96NG3 672 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TUBB6Q9BUF5 446 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TBC1D10AQ9BXI6 508 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 C2orf40Q9H1Z8 148 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PAPOLBQ9NRJ5 636 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ETAA1Q9NY74 926 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ANKFY1Q9P2R3 1169 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 DPPA5A6NC42 116 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 MSCO60682 206 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 EDN1P05305 212 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 GSTA2P09210 222 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TARSP26639 723 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PTPN4P29074 926 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ADCY8P40145 1251 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 SLC1A1P43005 524 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PTDSS1P48651 473 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ACOT2P49753 483 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 FAM110CQ1W6H9 321 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ZACNQ401N2 412 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ENOSF1Q7L5Y1 443 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 GPR142Q7Z601 462 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 CYP4X1Q8N118 509 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 LRRC71Q8N4P6 559 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 KCNV2Q8TDN2 545 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 MAML1Q92585 1016 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 MRPL4Q9BYD3 311 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ASB3Q9Y575 518 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 EDF1O60869 148 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 SMIM24O75264 130 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TOM1L1O75674 476 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 CHRNB2P17787 502 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TNNI1P19237 187 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 WDR4P57081 412 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 MXRA7P84157 204 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 GCNT1Q02742 428 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PTP4A2Q12974 167 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 BIRC2Q13490 618 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TFDP1Q14186 410 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 GRB14Q14449 540 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 RASA2Q15283 850 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 ZRSR2Q15696 482 aaKnown RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 MAPK6Q16659 721 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 IRGCQ6NXR0 463 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 DPP9Q86TI2 863 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TRABD2AQ86V40 505 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 RNF149Q8NC42 400 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 DENND1AQ8TEH3 1009 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 C1orf54Q8WWF1 131 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 EMID1Q96A84 441 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 SLC7A6OSQ96CW6 309 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PCDHB18PQ96TA0 734 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 PTPN18Q99952 460 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 DCLK3Q9C098 648 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 KATNBL1Q9H079 304 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 TBK1Q9UHD2 729 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 HAO1Q9UJM8 370 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 LRCH1Q9Y2L9 728 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 EME2A4GXA9 379 aaPredicted RBP9.4□□□□□ -0.9
GPNMB-202ENST00000381990 NDC80O14777 642 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 LGALS2P05162 132 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 PRKCBP05771 671 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 SRGAP2CP0DJJ0 459 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 MAPK4P31152 587 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF484Q5JVG2 852 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 FAM47EQ6ZV65 393 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF365Q70YC5 407 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 PLEKHH3Q7Z736 793 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 NOP9Q86U38 636 aaKnown RBP9.4□□□□□ -0.9
GPNMB-202ENST00000381990 LONP2Q86WA8 852 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 GALNT15Q8N3T1 639 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 ZCCHC9Q8N567 271 aaKnown RBP9.4□□□□□ -0.9
GPNMB-202ENST00000381990 PPTC7Q8NI37 304 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 LRRC8CQ8TDW0 803 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 TRAPPC12Q8WVT3 735 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.9
GPNMB-202ENST00000381990 C1orf112Q9NSG2 853 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
GPNMB-202ENST00000381990 EVPLQ92817 2033 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 C2CD2LO14523 706 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 CYP26A1O43174 497 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 ZWINTO95229 277 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 SGPL1O95470 568 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms