RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 MTMR12Q9C0I1 747 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 ECT2Q9H8V3 914 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.51■□□□□ 0.07
SNPH-202ENST00000381873 RAD51CO43502 376 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 CHRM3P20309 590 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 MDH1P40925 334 aaKnown RBP15.51■□□□□ 0.07
SNPH-202ENST00000381873 MTM1Q13496 603 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 MRPS31Q92665 395 aaKnown RBP15.51■□□□□ 0.07
SNPH-202ENST00000381873 GRID1Q9ULK0 1009 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNPH-202ENST00000381873 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
SNPH-202ENST00000381873 LINC00523Q86TU6 105 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 ACOT1Q86TX2 421 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 FAM71DQ8N9W8 422 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 ZNF507Q8TCN5 953 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 CBWD1Q9BRT8 395 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 CD274Q9NZQ7 290 aa15.51■□□□□ 0.07
SNPH-202ENST00000381873 H7C4K7 107 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 PMPCBO75439 489 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 MYL2P10916 166 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 AMHR2Q16671 573 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 RARS2Q5T160 578 aaKnown RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 PKN3Q6P5Z2 889 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 MIB1Q86YT6 1006 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 SYTL5Q8TDW5 730 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 IL17RAQ96F46 866 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 ROPN1BQ9BZX4 212 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 SYNDIG1Q9H7V2 258 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 ROPN1Q9HAT0 212 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 CHORDC1Q9UHD1 332 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 DBR1Q9UK59 544 aaKnown RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 C5orf58C9J3I9 102 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 H0Y626 953 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 ITGA8P53708 1063 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 ALDH18A1P54886 795 aaKnown RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 KRT72Q14CN4 511 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 SEC23AQ15436 765 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 AP1ARQ63HQ0 302 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 SLC13A5Q86YT5 568 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 HS6ST3Q8IZP7 471 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 PPP1R36Q96LQ0 422 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 VPS9D1Q9Y2B5 631 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 A0A087X0T9 212 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 H3BRB1 525 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 NFIBO00712 420 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 MEFVO15553 781 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 CKMP06732 381 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 FAM228BP0C875 321 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 ZRANB3Q5FWF4 1079 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 METTL7BQ6UX53 244 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 PPIL6Q8IXY8 311 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 C4orf19Q8IY42 314 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 SH2D3CQ8N5H7 860 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 USP13Q92995 863 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 SLC4A9Q96Q91 983 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 TUT1Q9H6E5 874 aaKnown RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 MARCOQ9UEW3 520 aaPredicted RBP15.5■□□□□ 0.07
SNPH-202ENST00000381873 CRLS1Q9UJA2 301 aa15.5■□□□□ 0.07
SNPH-202ENST00000381873 OCM2P0CE71 109 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 OCMP0CE72 109 aaPredicted RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 TGFB3P10600 412 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 E2F4Q16254 413 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 ICA1LQ8NDH6 482 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 STAMBPL1Q96FJ0 436 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 KBTBD4Q9NVX7 518 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 AURKCQ9UQB9 309 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 FAM32AQ9Y421 112 aaKnown RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 PARP4Q9UKK3 1724 aaKnown RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 RPL10AP62906 217 aaKnown RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 PCYOX1LQ8NBM8 494 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 TFB1MQ8WVM0 346 aaKnown RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 MRPL1Q9BYD6 325 aaKnown RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 SPATC1LQ9H0A9 340 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 THAP2Q9H0W7 228 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 SMARCAL1Q9NZC9 954 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 CYB561D2O14569 222 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 DDR1Q08345 913 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 PCNX4Q63HM2 1172 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 FBXO32Q969P5 355 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 CYFIP2Q96F07 1278 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 PRMT1Q99873 361 aaKnown RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 RIOX1Q9H6W3 641 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 THP07101 528 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 PON1P27169 355 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 GIT2Q14161 759 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 INPP5AQ14642 412 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 TMC2Q8TDI7 906 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 BHMTQ93088 406 aa15.49■□□□□ 0.07
SNPH-202ENST00000381873 CINPQ9BW66 212 aaPredicted RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 MORC2Q9Y6X9 1032 aaPredicted RBP15.49■□□□□ 0.07
SNPH-202ENST00000381873 CHN1P15882 459 aa15.48■□□□□ 0.07
SNPH-202ENST00000381873 COILP38432 576 aaPredicted RBP15.48■□□□□ 0.07
SNPH-202ENST00000381873 LRRC74AQ0VAA2 488 aa15.48■□□□□ 0.07
SNPH-202ENST00000381873 NFE2Q16621 373 aaPredicted RBP15.48■□□□□ 0.07
SNPH-202ENST00000381873 SEPT8Q92599 483 aa15.48■□□□□ 0.07
SNPH-202ENST00000381873 CELF4Q9BZC1 486 aaKnown RBP15.48■□□□□ 0.07
SNPH-202ENST00000381873 CPA4Q9UI42 421 aa15.48■□□□□ 0.07
SNPH-202ENST00000381873 NRXN3Q9Y4C0 1643 aa15.48■□□□□ 0.07
SNPH-202ENST00000381873 SUPT3HB4E1H0 165 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms