RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 VSTM4Q8IW00 320 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 FUKQ8N0W3 1084 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 CASP10Q92851 521 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 FUBP3Q96I24 572 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDGFB-202ENST00000381551 HNRNPABQ99729 332 aaKnown RBP16.44■□□□□ 0.22
PDGFB-202ENST00000381551 TTYH3Q9C0H2 523 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 MAN1C1Q9NR34 630 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 ABI2Q9NYB9 513 aaPredicted RBP16.44■□□□□ 0.22
PDGFB-202ENST00000381551 PLXNA3P51805 1871 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 ITIH6Q6UXX5 1313 aa16.44■□□□□ 0.22
PDGFB-202ENST00000381551 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CLDN5O00501 218 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CALCAP01258 141 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 PNMA6AP0CW24 399 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-202ENST00000381551 HAPLN1P10915 354 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CCDC130P13994 396 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 TUFMP49411 452 aaKnown RBP16.43■□□□□ 0.22
PDGFB-202ENST00000381551 ZNF75DP51815 510 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 PPP1R26Q5T8A7 1209 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-202ENST00000381551 ARHGAP17Q68EM7 881 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CCDC149Q6ZUS6 474 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 BAP1Q92560 729 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
PDGFB-202ENST00000381551 MRFAP1L1Q96HT8 127 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 SPAG5Q96R06 1193 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 RHOBTB2Q9BYZ6 727 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 FAM49BQ9NUQ9 324 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CLDND1Q9NY35 253 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 CLEC1BQ9P126 229 aa16.43■□□□□ 0.22
PDGFB-202ENST00000381551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.42■□□□□ 0.22
PDGFB-202ENST00000381551 PRRG1O14668 218 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 ZMYND10O75800 440 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 C8AP07357 584 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 CD19P15391 556 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 BDNFP23560 247 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 SOX5P35711 763 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 STAT1P42224 750 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 MAGEA11P43364 429 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 DLX2Q07687 328 aaPredicted RBP16.42■□□□□ 0.22
PDGFB-202ENST00000381551 SGO2Q562F6 1265 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 SPECC1LQ69YQ0 1117 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 ANKRD54Q6NXT1 300 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 ELMSAN1Q6PJG2 1045 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 VSTM1Q6UX27 236 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 TTC9BQ8N6N2 239 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 SLC7A14Q8TBB6 771 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 IQCDQ96DY2 449 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 MED10Q9BTT4 135 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 ZNF518BQ9C0D4 1074 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 MYO6Q9UM54 1294 aa16.42■□□□□ 0.22
PDGFB-202ENST00000381551 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDGFB-202ENST00000381551 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 RFPL2O75678 378 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 PAPLNO95428 1278 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 SRGAP2BP0DMP2 458 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 HOXB8P17481 243 aaPredicted RBP16.41■□□□□ 0.22
PDGFB-202ENST00000381551 BPIFB4P59827 614 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 PTK2Q05397 1052 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 CNGA2Q16280 664 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 MGAT5BQ3V5L5 792 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 PPM1LQ5SGD2 360 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 LIN9Q5TKA1 542 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 SYCE2Q6PIF2 218 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 FAM35AQ86V20 835 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 SLC47A2Q86VL8 602 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 C12orf76Q8N812 135 aaPredicted RBP16.41■□□□□ 0.22
PDGFB-202ENST00000381551 CPLX3Q8WVH0 158 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 ZNF606Q8WXB4 792 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 TMEM30AQ9NV96 361 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 DZANK1Q9NVP4 752 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 CAPN11Q9UMQ6 739 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 INSL5Q9Y5Q6 135 aa16.41■□□□□ 0.22
PDGFB-202ENST00000381551 CCDC195A0A1B0GUA6 201 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 GOLGA6L3A6NEY3 463 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 O00370 1275 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 TBX10O75333 385 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 SOAT2O75908 522 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 GFPT2O94808 682 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 GYPCP04921 128 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 CYP11B1P15538 503 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
PDGFB-202ENST00000381551 ADORA2BP29275 332 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 GNA15P30679 374 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 GRIK1P39086 918 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 CACNA2D1P54289 1103 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 DDR2Q16832 855 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 ANKRD52Q8NB46 1076 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 CMASQ8NFW8 434 aaPredicted RBP16.4■□□□□ 0.22
PDGFB-202ENST00000381551 SMARCD1Q96GM5 515 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 MSLNLQ96KJ4 702 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 C8orf48Q96LL4 319 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 KCNK16Q96T55 309 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 SEPT5Q99719 369 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms