RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 TLR9Q9NR96 1032 aa5.8□□□□□ -1.48
GEN1-202ENST00000381254 TUBGCP4Q9UGJ1 667 aa5.8□□□□□ -1.48
GEN1-202ENST00000381254 CDY2AQ9Y6F7 541 aa5.8□□□□□ -1.48
GEN1-202ENST00000381254 CDY1Q9Y6F8 540 aa5.8□□□□□ -1.48
GEN1-202ENST00000381254 LRRC53A6NM62 1247 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 GLUD1P00367 558 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ADORA1P30542 326 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 OR1G1P47890 313 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ALDH1A3P47895 512 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 RAB15P59190 212 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 LRRC23Q53EV4 343 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 CENPPQ6IPU0 288 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 CRELD2Q6UXH1 353 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 RFX6Q8HWS3 928 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 GPD1LQ8N335 351 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 BEST2Q8NFU1 509 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 KLHL5Q96PQ7 755 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 TCF25Q9BQ70 676 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 EML4Q9HC35 981 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 AVENQ9NQS1 362 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 KBTBD4Q9NVX7 518 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 WHRNQ9P202 907 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 MAP10Q9P2G4 905 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 MAPK8IP1Q9UQF2 711 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 TMEM247A6NEH6 219 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 SMIM23A6NLE4 172 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 MEI4A8MW99 385 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 FKBP6O75344 327 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 FGF19O95750 216 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 F9P00740 461 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 CPB1P15086 417 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 HNRNPH3P31942 346 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 POU5F1Q01860 360 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 CSTF1Q05048 431 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 NUGGCQ68CJ6 796 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ADHFE1Q8IWW8 467 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 TC2NQ8N9U0 490 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.79□□□□□ -1.48
GEN1-202ENST00000381254 LRFN3Q9BTN0 628 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 MRPL4Q9BYD3 311 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 CRISPLD2Q9H0B8 497 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ZNF112Q9UJU3 913 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 AKAP11Q9UKA4 1901 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 CHMP2AO43633 222 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ABL1P00519 1130 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ITGA4P13612 1032 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ARL1P40616 181 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 RXRGP48443 463 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 VAMP7P51809 220 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 GJA9P57773 515 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 SKOR1P84550 965 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 LRRC38Q5VT99 294 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 GET4Q7L5D6 327 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 ATG9AQ7Z3C6 839 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 SPATA21Q7Z572 469 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ITIH5Q86UX2 942 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 METTL16Q86W50 562 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 CERS5Q8N5B7 392 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 NSUN4Q96CB9 384 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 FAM212AQ96EL1 285 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 XPO6Q96QU8 1125 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 SRPK1Q96SB4 655 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 AGPAT1Q99943 283 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ERP44Q9BS26 406 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 INTS2Q9H0H0 1204 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 BHMT2Q9H2M3 363 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 PABPC3Q9H361 631 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 R3HDMLQ9H3Y0 253 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 CYP3A43Q9HB55 503 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.79□□□□□ -1.48
GEN1-202ENST00000381254 PSMC3IPQ9P2W1 217 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 APEX2Q9UBZ4 518 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 CAP1Q01518 475 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ZNF543Q08ER8 600 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 DUOXA2Q1HG44 320 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 MMEL1Q495T6 779 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 SIX6OS1Q8N1H7 587 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ZNF564Q8TBZ8 553 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 SCFD1Q8WVM8 642 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 TSC22D3Q99576 134 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 PTPN18Q99952 460 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 GANQ9H2C0 597 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 ENOPH1Q9UHY7 261 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 NDRG2Q9UN36 371 aaKnown RBP5.79□□□□□ -1.48
GEN1-202ENST00000381254 USTQ9Y2C2 406 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 PI4K2BG5E9Z4 385 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 PIK3R2O00459 728 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 GYG2O15488 501 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 BRAFP15056 766 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 FDFT1P37268 417 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 IFNAR2P48551 515 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 EPS8Q12929 822 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ST3GAL2Q16842 350 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 SGSM1Q2NKQ1 1148 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 LRRC31Q6UY01 552 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 LCA5Q86VQ0 697 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 ZNF354CQ86Y25 554 aa5.79□□□□□ -1.48
GEN1-202ENST00000381254 PARP9Q8IXQ6 854 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms