RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 NIFKQ9BYG3 293 aaKnown RBP13.13□□□□□ -0.31
CDX2-201ENST00000381020 KLHL8Q9P2G9 620 aaPredicted RBP13.13□□□□□ -0.31
CDX2-201ENST00000381020 GPR25O00155 361 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 PIAS1O75925 651 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 MCF2P10911 925 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 ATP4AP20648 1035 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 ARL1P40616 181 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 GTF2A1P52655 376 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 CENPCQ03188 943 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 CFAP157Q5JU67 520 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 C3orf62Q6ZUJ4 267 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 SRLQ86TD4 932 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 USP18Q9UMW8 372 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 APOL1O14791 398 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 MICAL2O94851 1124 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 MOCS2O96007 188 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 AGTP01019 485 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 PTGISQ16647 500 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDX2-201ENST00000381020 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 MYH7BA7E2Y1 1941 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 MYH4Q9Y623 1939 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 E5RJQ4 531 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 SESN2P58004 480 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 CCNG2Q16589 344 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 HIBCHQ6NVY1 386 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 SPATS2Q86XZ4 545 aaKnown RBP13.12□□□□□ -0.31
CDX2-201ENST00000381020 EFCAB13Q8IY85 973 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 HASPINQ8TF76 798 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 SLC13A1Q9BZW2 595 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 TNFSF13BQ9Y275 285 aa13.12□□□□□ -0.31
CDX2-201ENST00000381020 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 CCDC78A2IDD5 438 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 LSM8O95777 96 aaKnown RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 C15orf59Q2T9L4 293 aaPredicted RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 FAM182AQ5T1J6 154 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 AGBL2Q5U5Z8 902 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 SYDE1Q6ZW31 735 aaPredicted RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 IQCKQ8N0W5 287 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 ATP11CQ8NB49 1132 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 FAM172AQ8WUF8 416 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 LRRN4Q8WUT4 740 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 TGS1Q96RS0 853 aaKnown RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 ASB7Q9H672 318 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 STAP1Q9ULZ2 295 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 R3HDM2Q9Y2K5 976 aaKnown RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 RECQL4O94761 1208 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 LMO3Q8TAP4 145 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 SREK1Q8WXA9 508 aaKnown RBP13.11□□□□□ -0.31
CDX2-201ENST00000381020 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDX2-201ENST00000381020 DCTN4Q9UJW0 460 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 AGPSO00116 658 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 YY1P25490 414 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 NUMBP49757 651 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 TAF6P49848 677 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 SULT1E1P49888 294 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 STAT4Q14765 748 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 VCPIP1Q96JH7 1222 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 TRABDQ9H4I3 376 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
CDX2-201ENST00000381020 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 B3GAT3O94766 335 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 VNN1O95497 513 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 CD4P01730 458 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 ZNF449Q6P9G9 518 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 B3GNT9Q6UX72 402 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 PID1Q7Z2X4 250 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 TBC1D1Q86TI0 1168 aaPredicted RBP13.1□□□□□ -0.31
CDX2-201ENST00000381020 CDKL2Q92772 493 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 TACO1Q9BSH4 297 aaKnown RBP13.1□□□□□ -0.31
CDX2-201ENST00000381020 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 SMYD2Q9NRG4 433 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 MRPL42Q9Y6G3 142 aaKnown RBP13.1□□□□□ -0.31
CDX2-201ENST00000381020 MIPP30301 263 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 CPT1AP50416 773 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 FBXO47Q5MNV8 452 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
CDX2-201ENST00000381020 C1orf220Q5T0J3 134 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms