RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TP73O15350 636 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 SHOX2O60902 331 aaPredicted RBP20.29■□□□□ 0.84
GMDS-201ENST00000380805 GAS8O95995 478 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 CD4P01730 458 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 NUDT17P0C025 328 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 IVDP26440 423 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 PSMC4P43686 418 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 PLTPP55058 493 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 ZNF200P98182 395 aaPredicted RBP20.29■□□□□ 0.84
GMDS-201ENST00000380805 SLC25A11Q02978 314 aaKnown RBP20.29■□□□□ 0.84
GMDS-201ENST00000380805 KRT17Q04695 432 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 PKDCCQ504Y2 493 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 LIMS2Q7Z4I7 341 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 JOSD2Q8TAC2 188 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 TRIM6Q9C030 488 aaPredicted RBP20.29■□□□□ 0.84
GMDS-201ENST00000380805 EPB41L4BQ9H329 900 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 TMBIM4Q9HC24 238 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 MTRF1LQ9UGC7 380 aaKnown RBP20.29■□□□□ 0.84
GMDS-201ENST00000380805 PIN4Q9Y237 131 aaKnown RBP20.29■□□□□ 0.84
GMDS-201ENST00000380805 HES2Q9Y543 173 aa20.29■□□□□ 0.84
GMDS-201ENST00000380805 HMGB1P1B2RPK0 211 aaPredicted RBP20.28■□□□□ 0.84
GMDS-201ENST00000380805 PPEF2O14830 753 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 FKTNO75072 461 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 LRCH4O75427 683 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 KRT1P04264 644 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 SETSIPP0DME0 302 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 ATF7P17544 494 aaPredicted RBP20.28■□□□□ 0.84
GMDS-201ENST00000380805 EIF3BP55884 814 aaKnown RBP20.28■□□□□ 0.84
GMDS-201ENST00000380805 SKOR1P84550 965 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 ZNF844Q08AG5 666 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 TAZQ16635 292 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 RHBDF2Q6PJF5 856 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 SPOCD1Q6ZMY3 1216 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 C7orf31Q8N865 590 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 PPP1R13LQ8WUF5 828 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 ATG4AQ8WYN0 398 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 PABPC3Q9H361 631 aaKnown RBP20.28■□□□□ 0.84
GMDS-201ENST00000380805 TSPAN16Q9UKR8 245 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 CENPFP49454 3210 aa20.28■□□□□ 0.84
GMDS-201ENST00000380805 XPOTO43592 962 aaKnown RBP20.27■□□□□ 0.84
GMDS-201ENST00000380805 PFKMP08237 780 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 ITIH2P19823 946 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 PSMA2P25787 234 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 PPP1R7Q15435 360 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 KCTD19Q17RG1 926 aaPredicted RBP20.27■□□□□ 0.84
GMDS-201ENST00000380805 ATP13A4Q4VNC1 1196 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 MFSD7Q6UXD7 560 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 ARFGAP1Q8N6T3 406 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 IPO4Q8TEX9 1081 aaKnown RBP20.27■□□□□ 0.84
GMDS-201ENST00000380805 UBLCP1Q8WVY7 318 aaPredicted RBP20.27■□□□□ 0.84
GMDS-201ENST00000380805 ATP6V1G3Q96LB4 118 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 METTL5Q9NRN9 209 aaKnown RBP20.27■□□□□ 0.84
GMDS-201ENST00000380805 GDAP2Q9NXN4 497 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 PTPN22Q9Y2R2 807 aa20.27■□□□□ 0.84
GMDS-201ENST00000380805 hCG_1818297A0A087WSY0 165 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 MYADML2A6NDP7 307 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 C3orf70A6NLC5 250 aaPredicted RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 GOLGA8SH3BPF8 625 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 CAPN15O75808 1086 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 TJP3O95049 919 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 KRT7P08729 469 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 HSPA8P11142 646 aaKnown RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 PNPLA4P41247 253 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 CDKN2BP42772 138 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 SSR1P43307 286 aaKnown RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 LMAN1P49257 510 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 PMS2P54278 862 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 SLMAPQ14BN4 828 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 CEP85LQ5SZL2 805 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 ARHGAP17Q68EM7 881 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 RNF25Q96BH1 459 aaPredicted RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 MRPL45Q9BRJ2 306 aaKnown RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 MTG1Q9BT17 334 aaPredicted RBP20.27■□□□□ 0.83
GMDS-201ENST00000380805 HEMGNQ9BXL5 484 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 SYNCQ9H7C4 482 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 NME7Q9Y5B8 376 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 SNX9Q9Y5X1 595 aa20.27■□□□□ 0.83
GMDS-201ENST00000380805 RPS6KA5O75582 802 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 FCGRTP55899 365 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 CAV1Q03135 178 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 LLGL1Q15334 1064 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 TFDP3Q5H9I0 405 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 TXNRD3NBQ6F5E7 133 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 STK32AQ8WU08 396 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 SNF8Q96H20 258 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 ZNF560Q96MR9 790 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 GTF2IRD1Q9UHL9 959 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 ATP8A1Q9Y2Q0 1164 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 HTTP42858 3142 aa20.26■□□□□ 0.83
GMDS-201ENST00000380805 RARGP13631 454 aa20.25■□□□□ 0.83
GMDS-201ENST00000380805 LMNB2Q03252 620 aa20.25■□□□□ 0.83
GMDS-201ENST00000380805 ADCY2Q08462 1091 aa20.25■□□□□ 0.83
GMDS-201ENST00000380805 CALCOCO2Q13137 446 aa20.25■□□□□ 0.83
GMDS-201ENST00000380805 SNX1Q13596 522 aa20.25■□□□□ 0.83
GMDS-201ENST00000380805 HADHQ16836 314 aaKnown RBP20.25■□□□□ 0.83
GMDS-201ENST00000380805 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
GMDS-201ENST00000380805 FBXO47Q5MNV8 452 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms