RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SPTLC2O15270 562 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 NOL4O94818 638 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 HOXC13P31276 330 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 HOXD13P35453 343 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 LHX1P48742 406 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 RPL10AP62906 217 aaKnown RBP18.09■□□□□ 0.49
SMN2-201ENST00000380741 RUNX3Q13761 415 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 SOWAHAQ2M3V2 549 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 LAIR1Q6GTX8 287 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 STXBP4Q6ZWJ1 553 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 MON1AQ86VX9 555 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 SYNPOQ8N3V7 929 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 OR5B17Q8NGF7 314 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 RIN3Q8TB24 985 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 CHFRQ96EP1 664 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 ANKRD36BP1Q96IX9 119 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 TRIM9Q9C026 710 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 EBF3Q9H4W6 596 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 KIF9Q9HAQ2 790 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 TDP1Q9NUW8 608 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 RALGAPA1Q6GYQ0 2036 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 PTPRDP23468 1912 aa18.09■□□□□ 0.49
SMN2-201ENST00000380741 SPTBN2O15020 2390 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 ZNF233A6NK53 670 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 SOBPA7XYQ1 873 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 HRO43593 1189 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 PCSK1P29120 753 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 LMNB2Q03252 620 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 MYO1EQ12965 1108 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 SRSF5Q13243 272 aaKnown RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 SIM2Q14190 667 aaPredicted RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 CFAP221Q4G0U5 840 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 HEATR6Q6AI08 1181 aaKnown RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 LONP2Q86WA8 852 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 SPATA2LQ8IUW3 424 aaPredicted RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 TRMT2BQ96GJ1 504 aaKnown RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 HPDLQ96IR7 371 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 MYRFLQ96LU7 910 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 BACH2Q9BYV9 841 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 HSPBP1Q9NZL4 362 aa18.08■□□□□ 0.48
SMN2-201ENST00000380741 TFIP11Q9UBB9 837 aaKnown RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 UXTQ9UBK9 157 aaPredicted RBP18.08■□□□□ 0.48
SMN2-201ENST00000380741 PPP6R2O75170 966 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 TNNC2P02585 160 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 ARSAP15289 507 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 ASIC1P78348 528 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 SPEM2Q0P670 501 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 ZNF268Q14587 947 aaPredicted RBP18.07■□□□□ 0.48
SMN2-201ENST00000380741 PKN3Q6P5Z2 889 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 LIMS2Q7Z4I7 341 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 KBTBD7Q8WVZ9 684 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 DHX58Q96C10 678 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 FUBP3Q96I24 572 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMN2-201ENST00000380741 CUEDC2Q9H467 287 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 TRPC7Q9HCX4 862 aa18.07■□□□□ 0.48
SMN2-201ENST00000380741 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
SMN2-201ENST00000380741 HELZP42694 1942 aaKnown RBP18.07■□□□□ 0.48
SMN2-201ENST00000380741 PRR5-ARHGAP8B1AHC4 643 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMN2-201ENST00000380741 ATP2C2O75185 946 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 RETP07949 1114 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 LMO2P25791 158 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 CNR2P34972 360 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 PSMC1P62191 440 aaKnown RBP18.06■□□□□ 0.48
SMN2-201ENST00000380741 ARHGAP8P85298 464 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 SURF1Q15526 300 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 DUOXA2Q1HG44 320 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 TMEM196Q5HYL7 178 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 FSTL4Q6MZW2 842 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 CC2D1AQ6P1N0 951 aaPredicted RBP18.06■□□□□ 0.48
SMN2-201ENST00000380741 FAM171BQ6P995 826 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 EPM2AIP1Q7L775 607 aaPredicted RBP18.06■□□□□ 0.48
SMN2-201ENST00000380741 DPH6Q7L8W6 267 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 SCN4BQ8IWT1 228 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 ZNF396Q96N95 335 aaPredicted RBP18.06■□□□□ 0.48
SMN2-201ENST00000380741 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 SYT15Q9BQS2 421 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 CDV3Q9UKY7 258 aaKnown RBP18.06■□□□□ 0.48
SMN2-201ENST00000380741 SPAG17Q6Q759 2223 aa18.06■□□□□ 0.48
SMN2-201ENST00000380741 TRDMT1O14717 391 aaKnown RBP18.05■□□□□ 0.48
SMN2-201ENST00000380741 TGFB1I1O43294 461 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 YEATS4O95619 227 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 SDHBP21912 280 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 HOXA6P31267 233 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 MAGEA11P43364 429 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 ATXN1P54253 815 aaKnown RBP18.05■□□□□ 0.48
SMN2-201ENST00000380741 AMPD3Q01432 767 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 GRSF1Q12849 480 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMN2-201ENST00000380741 MTF1Q14872 753 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 SNRNP35Q16560 246 aaKnown RBP18.05■□□□□ 0.48
SMN2-201ENST00000380741 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 CNNM4Q6P4Q7 775 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 SHC4Q6S5L8 630 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 C4orf50Q6ZRC1 276 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 IQUBQ8NA54 791 aa18.05■□□□□ 0.48
SMN2-201ENST00000380741 ZNF507Q8TCN5 953 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms