RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 LCLAT1Q6UWP7 414 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 C3orf20Q8ND61 904 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 CD101Q93033 1021 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 HEXIM2Q96MH2 286 aaKnown RBP14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 PPP1R10Q96QC0 940 aaKnown RBP14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 ELOVL4Q9GZR5 314 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 STARD7Q9NQZ5 370 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 GDF3Q9NR23 364 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 TPX2Q9ULW0 747 aaKnown RBP14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 SNX9Q9Y5X1 595 aa14.61□□□□□ -0.07
TNFSF13-203ENST00000380535 KPNA7A9QM74 516 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 GLI1P08151 1106 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 CTSHP09668 335 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 RAP1GAPP47736 663 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 NDST1P52848 882 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 EPHB4P54760 987 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 RWDD2BP57060 319 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 MAMLD1Q13495 774 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 DSC3Q14574 896 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 ZNF268Q14587 947 aaPredicted RBP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 DCAF12L1Q5VU92 463 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 DNAJC24Q6P3W2 148 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 SND1Q7KZF4 910 aaKnown RBP eCLIP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 PASD1Q8IV76 773 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 TFAP2BQ92481 460 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 RUNDC3BQ96NL0 473 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 RMI1Q9H9A7 625 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 PADI3Q9ULW8 664 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 A0A1W2PQ45 241 aaPredicted RBP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 A0A1W2PQY0 241 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 PSTPIP1O43586 416 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 HUS1O60921 280 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 THP07101 528 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 GUCY2FP51841 1108 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 CDH8P55286 799 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 ARHGAP17Q68EM7 881 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 SCARA3Q6AZY7 606 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 EMBQ6PCB8 327 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 LIMS2Q7Z4I7 341 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 IFT20Q8IY31 132 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 C1orf131Q8NDD1 294 aaKnown RBP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 APPL2Q8NEU8 664 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 RIN2Q8WYP3 895 aaPredicted RBP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 TNIP3Q96KP6 325 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 AGAP3Q96P47 875 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 SLITRK6Q9H5Y7 841 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 CYLDQ9NQC7 956 aa14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 CHORDC1Q9UHD1 332 aaPredicted RBP14.6□□□□□ -0.07
TNFSF13-203ENST00000380535 A0A0U1RQF3 1178 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 O00370 1275 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 CALCAP01258 141 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 CETN2P41208 172 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 GABRB2P47870 512 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 PIGHQ14442 188 aaPredicted RBP14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 TMEM86AQ8N2M4 240 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 MICALL1Q8N3F8 863 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 FNIP1Q8TF40 1166 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 STK32AQ8WU08 396 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 WNT8BQ93098 351 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 C18orf25Q96B23 403 aaPredicted RBP14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 C18orf8Q96DM3 657 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 UROC1Q96N76 676 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 AP1M1Q9BXS5 423 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 SNX25Q9H3E2 840 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 HESX1Q9UBX0 185 aa14.59□□□□□ -0.07
TNFSF13-203ENST00000380535 TMEM110-MUSTN1A8MSY1 372 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 ARVCFO00192 962 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 DNM1LO00429 736 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 KRIT1O00522 736 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 MICAL2O94851 1124 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 WARSP23381 471 aaKnown RBP14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 LPIN1Q14693 890 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 ACAP1Q15027 740 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 GLRA4Q5JXX5 417 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 LRRC38Q5VT99 294 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 KLHL7Q8IXQ5 586 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 EIF1ADQ8N9N8 165 aaKnown RBP14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 CCDC26Q8TAB7 109 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 ALG3Q92685 438 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 CAVIN3Q969G5 261 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 RNPC3Q96LT9 517 aaKnown RBP14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 FTHL17Q9BXU8 183 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 RNF39Q9H2S5 420 aa14.58□□□□□ -0.07
TNFSF13-203ENST00000380535 TMEM191CA6NGB0 347 aa14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 INPPL1O15357 1258 aa14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 SART1O43290 800 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 RAD51CO43502 376 aa14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 FGGP02679 453 aa14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 PEX5P50542 639 aa14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 BFSP2Q13515 415 aa14.58□□□□□ -0.08
TNFSF13-203ENST00000380535 DENND1BQ6P3S1 775 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms