RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 OXCT2Q9BYC2 517 aaPredicted RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 MRPS26Q9BYN8 205 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 BRD8Q9H0E9 1235 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 PSTPIP2Q9H939 334 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 FAIMQ9NVQ4 179 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 TBC1D30Q9Y2I9 924 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 IQANK1A0A1B0GTG1 560 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 BUD23O43709 281 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 TFAP2AP05549 437 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ATF7P17544 494 aaPredicted RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 NMT1P30419 496 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 NT5C2P49902 561 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 PHEXP78562 749 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 SLC25A3Q00325 362 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ATG16L1Q676U5 607 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 CATSPER3Q86XQ3 398 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 TRIM50Q86XT4 487 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 CRLF3Q8IUI8 442 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 RELL1Q8IUW5 271 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 PASD1Q8IV76 773 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 SLFN12Q8IYM2 578 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ETNPPLQ8TBG4 499 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 DQX1Q8TE96 717 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 JADE3Q92613 823 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 BTBD9Q96Q07 612 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 PAFAH2Q99487 392 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 SYT11Q9BT88 431 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 POLR3CQ9BUI4 534 aaPredicted RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 HOMER2Q9NSB8 354 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 TBC1D23Q9NUY8 699 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 KCNK4Q9NYG8 393 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 RRN3Q9NYV6 651 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 DOLKQ9UPQ8 538 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 HBS1LQ9Y450 684 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 TELO2Q9Y4R8 837 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 MAD1L1Q9Y6D9 718 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ITGB4P16144 1822 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 IPO5O00410 1097 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 BIRC5O15392 142 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 STAMBPO95630 424 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 INHBAP08476 426 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 IDO1P14902 403 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 GCAP28676 217 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 HOXD13P35453 343 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 FDFT1P37268 417 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 AQP5P55064 265 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 HDAC4P56524 1084 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 CYTH1Q15438 398 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 HIF1AQ16665 826 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 MYLK3Q32MK0 819 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 PRR16Q569H4 304 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 HYIQ5T013 277 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 UGT2A3Q6UWM9 527 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ADGRG6Q86SQ4 1221 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 FAM178BQ8IXR5 827 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 TAB3Q8N5C8 712 aaPredicted RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ZMAT2Q96NC0 199 aaKnown RBP7.62□□□□□ -1.19
TRIM6-202ENST00000380097 IKZF4Q9H2S9 585 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 PLGRKTQ9HBL7 147 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 ACP6Q9NPH0 428 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 KCNQ5Q9NR82 932 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 GINM1Q9NU53 330 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 GGA1Q9UJY5 639 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 INPP5FQ9Y2H2 1132 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 RABGAP1Q9Y3P9 1069 aa7.62□□□□□ -1.19
TRIM6-202ENST00000380097 MYH3P11055 1940 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 CCDC195A0A1B0GUA6 201 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 TTLL13PA6NNM8 815 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 PRR5-ARHGAP8B1AHC4 643 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 H3BSA7 217 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 SGK1O00141 431 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 COPEO14579 308 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 DNALI1O14645 258 aaPredicted RBP7.61□□□□□ -1.19
TRIM6-202ENST00000380097 RGL2O15211 777 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 ZSCAN5DPP0CG00 497 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 GAP43P17677 238 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 SSTR1P30872 391 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 GCLMP48507 274 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 NR1H2P55055 460 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 ARHGAP8P85298 464 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 MTM1Q13496 603 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 GRAPQ13588 217 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 TFDP1Q14186 410 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 SF3B3Q15393 1217 aaKnown RBP7.61□□□□□ -1.19
TRIM6-202ENST00000380097 TBCCQ15814 346 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 SLC15A2Q16348 729 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 RARS2Q5T160 578 aaKnown RBP7.61□□□□□ -1.19
TRIM6-202ENST00000380097 TMEM53Q6P2H8 277 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 DPP8Q6V1X1 898 aaPredicted RBP7.61□□□□□ -1.19
TRIM6-202ENST00000380097 POU5F2Q8N7G0 328 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 GRAPLQ8TC17 118 aaPredicted RBP7.61□□□□□ -1.19
TRIM6-202ENST00000380097 PSPC1Q8WXF1 523 aaKnown RBP7.61□□□□□ -1.19
TRIM6-202ENST00000380097 PCDHB18PQ96TA0 734 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 HAUS8Q9BT25 410 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 GPR88Q9GZN0 384 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 KCNK13Q9HB14 408 aa7.61□□□□□ -1.19
TRIM6-202ENST00000380097 SSU72Q9NP77 194 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms