RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RAVER2Q9HCJ3 691 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 RGS18Q9NS28 235 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 WWP2O00308 870 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 RAD23BP54727 409 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 CDC73Q6P1J9 531 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 TRABDQ9H4I3 376 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 F5H5T6 163 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 KLHL18O94889 574 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 TXNP10599 105 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 MTSS1LQ765P7 747 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC26A4O43511 780 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 NDUFS2O75306 463 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ASS1P00966 412 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ACADLP28330 430 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 USP10Q14694 798 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 SNX8Q9Y5X2 465 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 VWA5AO00534 786 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 AGAP9Q5VTM2 703 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT73Q86Y46 540 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ATL2Q8NHH9 583 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 NDUFAF6Q330K2 333 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 TASP1Q9H6P5 420 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 RNF112Q9ULX5 631 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 WNK2Q9Y3S1 2297 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 IFNGR2P38484 337 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 OTOAQ7RTW8 1153 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 DYNLL2Q96FJ2 89 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 TMEM169Q96HH4 297 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 HMBSP08397 361 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ITIH5Q86UX2 942 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 PGM1P36871 562 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF284Q2VY69 593 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 GMCL1Q96IK5 515 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 V9GYQ6 96 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TM9SF1O15321 606 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 C21orf2O43822 256 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CNPPD1Q9BV87 410 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 RACGAP1Q9H0H5 632 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TMED10P49755 219 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC30A9Q6PML9 568 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF333Q96JL9 665 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 FAM200BP0CF97 657 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 GRK2P25098 689 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TLK2Q86UE8 772 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CENPLQ8N0S6 344 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TCP11X1B4DZS4 312 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 MBL2P11226 248 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 AKAP5P24588 427 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CASP8Q14790 479 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 GPRC5AQ8NFJ5 357 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 MIEF1Q9NQG6 463 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TRPC4Q9UBN4 977 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 STAT5BP51692 787 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 RAD54LQ92698 747 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 ZCCHC2Q9C0B9 1178 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 LIFRP42702 1097 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 RPS6KA5O75582 802 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT6AP02538 564 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 FTLP02792 175 aaPredicted RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT6BP04259 564 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TRIM49P0CI25 452 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 TRIM49CP0CI26 452 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT6CP48668 564 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 DHX34Q14147 1143 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 DCAF6Q58WW2 860 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 PLA2G4FQ68DD2 849 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 GLYCTKQ8IVS8 523 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CNPY3Q9BT09 278 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 SPATA2Q9UM82 520 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 SMG5Q9UPR3 1016 aaKnown RBP11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF711Q9Y462 761 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 KIAA0556O60303 1618 aa11.65□□□□□ -0.54
PTCHD1-201ENST00000379361 CCDC88AQ3V6T2 1871 aa11.65□□□□□ -0.55
PTCHD1-201ENST00000379361 PTH1RQ03431 593 aa11.65□□□□□ -0.55
PTCHD1-201ENST00000379361 GH1P01241 217 aa11.65□□□□□ -0.55
PTCHD1-201ENST00000379361 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 EEF2KO00418 725 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 AIM2O14862 343 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PCNAP12004 261 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 UBA2Q9UBT2 640 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 SNX24Q9Y343 169 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms