RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 BTBD9Q96Q07 612 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 MAK16Q9BXY0 300 aaKnown RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 SEPT3Q9UH03 358 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 PDXKO00764 312 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 IDO1P14902 403 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 KCNA6P17658 529 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 TRPC1P48995 793 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 KPNA1P52294 538 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 KCNQ4P56696 695 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 CEP55Q53EZ4 464 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 KCNK18Q7Z418 384 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 NCSTNQ92542 709 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 PRR11Q96HE9 360 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 PNMA5Q96PV4 448 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 TMEM117Q9H0C3 514 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 SUN2Q9UH99 717 aa11.42□□□□□ -0.58
USP6NL-202ENST00000379237 GNEQ9Y223 722 aaKnown RBP11.42□□□□□ -0.58
USP6NL-202ENST00000379237 ZMPSTE24O75844 475 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 MFAP3P55082 362 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 CASP7P55210 303 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 PTK6Q13882 451 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ZNF618Q5T7W0 954 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-202ENST00000379237 SHISA4Q96DD7 197 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 TSNARE1Q96NA8 513 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 CEP44Q9C0F1 390 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 RABL2BQ9UNT1 228 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 BCAP31P51572 246 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 PLOD1Q02809 727 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ODR4Q5SWX8 454 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 PLEKHO2Q8TD55 490 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 KCNK4Q9NYG8 393 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ADAMTS13Q76LX8 1427 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 TRIM49D1C9J1S8 452 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 TAF4O00268 1085 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ADAMTS3O15072 1205 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ZNF12P17014 697 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 ADAM17P78536 824 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 FUT2Q10981 343 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 TAS2R42Q7RTR8 314 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 HPS6Q86YV9 775 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 PQLC1Q8N2U9 271 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 GABPB2Q8TAK5 448 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-202ENST00000379237 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-202ENST00000379237 SKA1Q96BD8 255 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 DCLK3Q9C098 648 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 DNAJB4Q9UDY4 337 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 STAT3P40763 770 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 SLC1A1P43005 524 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 EPHA7Q15375 998 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 MAPK11Q15759 364 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 LRRC19Q9H756 370 aa11.41□□□□□ -0.58
USP6NL-202ENST00000379237 DDX43Q9NXZ2 648 aaKnown RBP11.41□□□□□ -0.58
USP6NL-202ENST00000379237 SLIT1O75093 1534 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 TCRBV5S4A2TA0A5A2 114 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ZBED1O96006 694 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 KRT76Q01546 638 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 GSTM4Q03013 218 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 NPY5RQ15761 445 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 PEX5LQ8IYB4 626 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 HELQQ8TDG4 1101 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 AZIN2Q96A70 460 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 SPC25Q9HBM1 224 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 COG5Q9UP83 839 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 FAM208AQ9UK61 1670 aaKnown RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 NCANO14594 1321 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 SIGLEC16A6NMB1 481 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 SLC37A4O43826 429 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 MXI1P50539 228 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 RALGPS1Q5JS13 557 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 GPR107Q5VW38 600 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ZCCHC23Q6ZST2 131 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 WNK4Q96J92 1243 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 PRICKLE1Q96MT3 831 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 SEMA6AQ9H2E6 1030 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 PCDHA3Q9Y5H8 950 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ZNF839A8K0R7 811 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 NOTOA8MTQ0 251 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 J3QRK9 145 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 AP3B1O00203 1094 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 DAB1O75553 588 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 BCL10O95999 233 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ZSCAN5DPP0CG00 497 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 BMP3P12645 472 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 EIF2AK2P19525 551 aaKnown RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 ACADVLP49748 655 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 CENPCQ03188 943 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms