RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 LRRC32Q14392 662 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 NFIL3Q16649 462 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 ANKRD40Q6AI12 368 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 DNAJB7Q7Z6W7 309 aaPredicted RBP14.75□□□□□ -0.05
PRPF18-202ENST00000378572 ARID3BQ8IVW6 561 aaPredicted RBP14.75□□□□□ -0.05
PRPF18-202ENST00000378572 ZC3H3Q8IXZ2 948 aaKnown RBP14.75□□□□□ -0.05
PRPF18-202ENST00000378572 OR10T2Q8NGX3 314 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 ANP32BQ92688 251 aaKnown RBP14.75□□□□□ -0.05
PRPF18-202ENST00000378572 CHRDQ9H2X0 955 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 TMEM206Q9H813 350 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 TRPV4Q9HBA0 871 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 DPP3Q9NY33 737 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 ABI2Q9NYB9 513 aaPredicted RBP14.75□□□□□ -0.05
PRPF18-202ENST00000378572 GMEB2Q9UKD1 530 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 USP18Q9UMW8 372 aa14.75□□□□□ -0.05
PRPF18-202ENST00000378572 NCANO14594 1321 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 PAX3P23760 479 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 SOX9P48436 509 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 CCR3P51677 355 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 SNRPFP62306 86 aaKnown RBP14.74□□□□□ -0.05
PRPF18-202ENST00000378572 CYP4F8P98187 520 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 LPAL2Q16609 132 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 PRR23BQ6ZRT6 265 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 CSGALNACT2Q8N6G5 542 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 GIPC2Q8TF65 315 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 PSMG2Q969U7 264 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 RSPRY1Q96DX4 576 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 ZNF560Q96MR9 790 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 ASB7Q9H672 318 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 SAMSN1Q9NSI8 373 aaKnown RBP14.74□□□□□ -0.05
PRPF18-202ENST00000378572 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
PRPF18-202ENST00000378572 EXOC7Q9UPT5 735 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 C2CD2Q9Y426 696 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 ANK1P16157 1881 aa14.74□□□□□ -0.05
PRPF18-202ENST00000378572 COL4A2P08572 1712 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 TUFMP49411 452 aaKnown RBP14.73□□□□□ -0.05
PRPF18-202ENST00000378572 NRLP54845 237 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 FKBP3Q00688 224 aaKnown RBP14.73□□□□□ -0.05
PRPF18-202ENST00000378572 PUM1Q14671 1186 aaKnown RBP eCLIP14.73□□□□□ -0.05
PRPF18-202ENST00000378572 SV2CQ496J9 727 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 FAM114A1Q8IWE2 563 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 NELFCDQ8IXH7 590 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 SYCP3Q8IZU3 236 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 ZBTB44Q8NCP5 570 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 GOLGA5Q8TBA6 731 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 TMEM174Q8WUU8 243 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 BORCS6Q96GS4 357 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 ZFYVE19Q96K21 471 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 ACCSQ96QU6 501 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 IER2Q9BTL4 223 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 LRRC3Q9BY71 257 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 FAM126AQ9BYI3 521 aaPredicted RBP14.73□□□□□ -0.05
PRPF18-202ENST00000378572 IKZF4Q9H2S9 585 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 TRPV5Q9NQA5 729 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 OTOGLQ3ZCN5 2332 aa14.73□□□□□ -0.05
PRPF18-202ENST00000378572 PIRO00625 290 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 CHADO15335 359 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 CALUO43852 315 aaPredicted RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 CDC25CP30307 473 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 TFAMQ00059 246 aaKnown RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 RSPO4Q2I0M5 234 aaPredicted RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 MSANTD3Q96H12 275 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 CEP63Q96MT8 703 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 FAM213AQ9BRX8 229 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 SRRTQ9BXP5 876 aaKnown RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 EPC1Q9H2F5 836 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 C8orf33Q9H7E9 229 aaPredicted RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 RBM12Q9NTZ6 932 aaKnown RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 FRYLO94915 3013 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 SHISA7A6NL88 538 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 TGFB1I1O43294 461 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 AP5Z1O43299 807 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 IL18RAPO95256 599 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 ADRB2P07550 413 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 ATP1A3P13637 1013 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 EEF1GP26641 437 aaKnown RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 CXCL12P48061 93 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 TSPY1Q01534 308 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 SATB1Q01826 763 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 FZD5Q13467 585 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 ARHGAP29Q52LW3 1261 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 WSCD1Q658N2 575 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 C1orf228Q6PIY5 440 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 GAREM2Q75VX8 874 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 HS2ST1Q7LGA3 356 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 IRF2BP1Q8IU81 584 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 DCP1BQ8IZD4 617 aaKnown RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 TTC16Q8NEE8 873 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 SAAL1Q96ER3 474 aa14.72□□□□□ -0.05
PRPF18-202ENST00000378572 SMG9Q9H0W8 520 aaKnown RBP14.72□□□□□ -0.05
PRPF18-202ENST00000378572 F5P12259 2224 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 ANO9A1A5B4 782 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 LRRC10BA6NIK2 292 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 SPECC1L-ADORA2AF8WAN1 911 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 PRAMEF12O95522 483 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 CYP11A1P05108 521 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 ATF6P18850 670 aa14.71□□□□□ -0.05
PRPF18-202ENST00000378572 CDK11BP21127 795 aaKnown RBP14.71□□□□□ -0.05
PRPF18-202ENST00000378572 FANCCQ00597 558 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms