RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 MED10Q9BTT4 135 aa21.31■■□□□ 1
RER1-204ENST00000378518 ELOVL4Q9GZR5 314 aa21.31■■□□□ 1
RER1-204ENST00000378518 HMGXB4Q9UGU5 601 aa21.31■■□□□ 1
RER1-204ENST00000378518 XIRP2A4UGR9 3374 aa21.31■■□□□ 1
RER1-204ENST00000378518 SOAT2O75908 522 aa21.3■■□□□ 1
RER1-204ENST00000378518 CYP2F1P24903 491 aa21.3■■□□□ 1
RER1-204ENST00000378518 MAGEA11P43364 429 aa21.3■■□□□ 1
RER1-204ENST00000378518 ORC1Q13415 861 aa21.3■■□□□ 1
RER1-204ENST00000378518 TAF12Q16514 161 aa21.3■■□□□ 1
RER1-204ENST00000378518 CCDC142Q17RM4 750 aa21.3■■□□□ 1
RER1-204ENST00000378518 PABPC1LQ4VXU2 614 aaKnown RBP21.3■■□□□ 1
RER1-204ENST00000378518 FKBP15Q5T1M5 1219 aa21.3■■□□□ 1
RER1-204ENST00000378518 VSTM1Q6UX27 236 aa21.3■■□□□ 1
RER1-204ENST00000378518 LEMD2Q8NC56 503 aa21.3■■□□□ 1
RER1-204ENST00000378518 VPS16Q9H269 839 aa21.3■■□□□ 1
RER1-204ENST00000378518 LIMA1Q9UHB6 759 aaKnown RBP21.3■■□□□ 1
RER1-204ENST00000378518 NR2E1Q9Y466 385 aa21.3■■□□□ 1
RER1-204ENST00000378518 SPTBN5Q9NRC6 3674 aaKnown RBP21.3■■□□□ 1
RER1-204ENST00000378518 DOCK6Q96HP0 2047 aa21.29■■□□□ 1
RER1-204ENST00000378518 TRIM66O15016 1216 aa21.29■■□□□ 1
RER1-204ENST00000378518 ZNF18P17022 549 aa21.29■■□□□ 1
RER1-204ENST00000378518 SLC9A1P19634 815 aa21.29■■□□□ 1
RER1-204ENST00000378518 BDNFP23560 247 aa21.29■■□□□ 1
RER1-204ENST00000378518 ANXA13P27216 316 aa21.29■■□□□ 1
RER1-204ENST00000378518 ZNF394Q53GI3 561 aa21.29■■□□□ 1
RER1-204ENST00000378518 CYP4A22Q5TCH4 519 aa21.29■■□□□ 1
RER1-204ENST00000378518 RRAGAQ7L523 313 aa21.29■■□□□ 1
RER1-204ENST00000378518 ENOSF1Q7L5Y1 443 aa21.29■■□□□ 1
RER1-204ENST00000378518 ARHGEF19Q8IW93 802 aa21.29■■□□□ 1
RER1-204ENST00000378518 SCN4BQ8IWT1 228 aa21.29■■□□□ 1
RER1-204ENST00000378518 ADHFE1Q8IWW8 467 aa21.29■■□□□ 1
RER1-204ENST00000378518 FEZF2Q8TBJ5 459 aa21.29■■□□□ 1
RER1-204ENST00000378518 TMEM176AQ96HP8 235 aa21.29■■□□□ 1
RER1-204ENST00000378518 TWNKQ96RR1 684 aa21.29■■□□□ 1
RER1-204ENST00000378518 CORO1BQ9BR76 489 aa21.29■■□□□ 1
RER1-204ENST00000378518 ASAH2Q9NR71 780 aa21.29■■□□□ 1
RER1-204ENST00000378518 CEP72Q9P209 647 aa21.29■■□□□ 1
RER1-204ENST00000378518 DNMT3BQ9UBC3 853 aaKnown RBP21.29■■□□□ 1
RER1-204ENST00000378518 APEX2Q9UBZ4 518 aa21.29■■□□□ 1
RER1-204ENST00000378518 ATF6P18850 670 aa21.28■■□□□ 1
RER1-204ENST00000378518 FSHRP23945 695 aa21.28■■□□□ 1
RER1-204ENST00000378518 PON1P27169 355 aa21.28■■□□□ 1
RER1-204ENST00000378518 GRIK1P39086 918 aa21.28■■□□□ 1
RER1-204ENST00000378518 COPB1P53618 953 aaKnown RBP21.28■■□□□ 1
RER1-204ENST00000378518 MFAP3P55082 362 aa21.28■■□□□ 1
RER1-204ENST00000378518 IQCB1Q15051 598 aa21.28■■□□□ 1
RER1-204ENST00000378518 PDZD4Q76G19 769 aaPredicted RBP21.28■■□□□ 1
RER1-204ENST00000378518 ADAMTS19Q8TE59 1207 aa21.28■■□□□ 1
RER1-204ENST00000378518 WHAMMQ8TF30 809 aa21.28■■□□□ 1
RER1-204ENST00000378518 PSMG2Q969U7 264 aa21.28■■□□□ 1
RER1-204ENST00000378518 JAKMIP2Q96AA8 810 aa21.28■■□□□ 1
RER1-204ENST00000378518 ACSF2Q96CM8 615 aaPredicted RBP21.28■■□□□ 1
RER1-204ENST00000378518 LPIN3Q9BQK8 851 aa21.28■■□□□ 1
RER1-204ENST00000378518 B3GNT5Q9BYG0 378 aa21.28■■□□□ 1
RER1-204ENST00000378518 CBX8Q9HC52 389 aa21.28■■□□□ 1
RER1-204ENST00000378518 UBE2TQ9NPD8 197 aaPredicted RBP21.28■■□□□ 1
RER1-204ENST00000378518 HCFC1R1Q9NWW0 138 aa21.28■■□□□ 1
RER1-204ENST00000378518 PCDHB4Q9Y5E5 795 aa21.28■■□□□ 1
RER1-204ENST00000378518 NOTCH4Q99466 2003 aa21.28■■□□□ 1
RER1-204ENST00000378518 GREB1Q4ZG55 1949 aa21.27■■□□□ 1
RER1-204ENST00000378518 GOLGA6L19H0YKK7 550 aa21.27■■□□□ 1
RER1-204ENST00000378518 ZNF197O14709 1029 aa21.27■■□□□ 1
RER1-204ENST00000378518 FGF19O95750 216 aa21.27■■□□□ 1
RER1-204ENST00000378518 RHOP08100 348 aa21.27■■□□□ 1
RER1-204ENST00000378518 CSH1P0DML2 217 aa21.27■■□□□ 1
RER1-204ENST00000378518 CSH2P0DML3 217 aa21.27■■□□□ 1
RER1-204ENST00000378518 NTHL1P78549 312 aa21.27■■□□□ 1
RER1-204ENST00000378518 PHLDB3Q6NSJ2 640 aa21.27■■□□□ 1
RER1-204ENST00000378518 LRSAM1Q6UWE0 723 aa21.27■■□□□ 1
RER1-204ENST00000378518 GET4Q7L5D6 327 aaPredicted RBP21.27■■□□□ 1
RER1-204ENST00000378518 OTOP3Q7RTS5 596 aa21.27■■□□□ 1
RER1-204ENST00000378518 FAM35AQ86V20 835 aa21.27■■□□□ 1
RER1-204ENST00000378518 TDRD5Q8NAT2 981 aaKnown RBP21.27■■□□□ 1
RER1-204ENST00000378518 GIPC2Q8TF65 315 aa21.27■■□□□ 1
RER1-204ENST00000378518 SMARCD1Q96GM5 515 aa21.27■■□□□ 1
RER1-204ENST00000378518 RPGRIP1Q96KN7 1286 aa21.27■■□□□ 1
RER1-204ENST00000378518 CEP295NLQ96MC4 621 aa21.27■■□□□ 1
RER1-204ENST00000378518 HEXIM2Q96MH2 286 aaKnown RBP21.27■■□□□ 1
RER1-204ENST00000378518 ZNF518BQ9C0D4 1074 aa21.27■■□□□ 1
RER1-204ENST00000378518 HSD3B7Q9H2F3 369 aa21.27■■□□□ 1
RER1-204ENST00000378518 AVENQ9NQS1 362 aaPredicted RBP21.27■■□□□ 1
RER1-204ENST00000378518 FAM49BQ9NUQ9 324 aa21.27■■□□□ 1
RER1-204ENST00000378518 USTQ9Y2C2 406 aa21.27■■□□□ 1
RER1-204ENST00000378518 CCDC130P13994 396 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 GBP2P32456 591 aaPredicted RBP21.26■□□□□ 0.99
RER1-204ENST00000378518 RAD23BP54727 409 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 ZP2Q05996 745 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 DDR2Q16832 855 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 TMEM270Q6UE05 265 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 DNAJB7Q7Z6W7 309 aaPredicted RBP21.26■□□□□ 0.99
RER1-204ENST00000378518 UBR7Q8N806 425 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 SLC4A11Q8NBS3 891 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 SLC2A14Q8TDB8 520 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 CYFIP2Q96F07 1278 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 TSPY26PQ9H489 355 aa21.26■□□□□ 0.99
RER1-204ENST00000378518 MRPS23Q9Y3D9 190 aaKnown RBP21.26■□□□□ 0.99
RER1-204ENST00000378518 PATJQ8NI35 1801 aa21.25■□□□□ 0.99
RER1-204ENST00000378518 LRRC10BA6NIK2 292 aa21.25■□□□□ 0.99
RER1-204ENST00000378518 CLDN5O00501 218 aa21.25■□□□□ 0.99
RER1-204ENST00000378518 MYL4P12829 197 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms