RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 ANKZF1Q9H8Y5 726 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 HERC5Q9UII4 1024 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 C17orf102A2RUQ5 167 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 CCDC15Q0P6D6 951 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 WDR93Q6P2C0 686 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 IFNEQ86WN2 208 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 NFKBIZQ9BYH8 718 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 SGPL1O95470 568 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 HLA-DRAP01903 254 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 NDUFV1P49821 464 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 GOLGA7BQ2TAP0 167 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 ATPAF2Q8N5M1 289 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 LRRN4CLQ8ND94 238 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 SHCBP1Q8NEM2 672 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 LOC100653049A0A140TA62 436 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 KRT34O76011 436 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 SEPT3Q9UH03 358 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 MYPNQ86TC9 1320 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 SYNCRIPO60506 623 aaKnown RBP12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 PDGFRBP09619 1106 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 ZCCHC18P0CG32 403 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 DDX5P17844 614 aaKnown RBP12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 BFSP2Q13515 415 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 DGKDQ16760 1214 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 EDRF1Q3B7T1 1238 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 NAIF1Q69YI7 327 aaPredicted RBP12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 RD3Q7Z3Z2 195 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 TBC1D16Q8TBP0 767 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 CARD9Q9H257 536 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 TMEM8AQ9HCN3 771 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 PSMD3O43242 534 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 FAM111AQ96PZ2 611 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 CAAP1Q9H8G2 361 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 GIMAP4Q9NUV9 329 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 PAK5Q9P286 719 aa12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
PCDHA9-201ENST00000378122 PGK2P07205 417 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 PON1P27169 355 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 EFNA5P52803 228 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 TOMM20Q15388 145 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 ZNF560Q96MR9 790 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 PPCSQ9HAB8 311 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 FAM49BQ9NUQ9 324 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 GID8Q9NWU2 228 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 MKL2Q9ULH7 1088 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 LRRC74AQ0VAA2 488 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 KYAT1Q16773 422 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SGSM1Q2NKQ1 1148 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 GPAT2Q6NUI2 795 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 FEZF2Q8TBJ5 459 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 DTNAQ9Y4J8 743 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SLC37A4O43826 429 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 GPD1P21695 349 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 EMC2Q15006 297 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 PPP1R13LQ8WUF5 828 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 ERGIC2Q96RQ1 377 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SLC26A4O43511 780 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 CST8O60676 142 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 NUDT2P50583 147 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 HSD17B4P51659 736 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 SKOR1P84550 965 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 ACAD10Q6JQN1 1059 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 PAWRQ96IZ0 340 aaKnown RBP12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 HEY2Q9UBP5 337 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 CAPN6Q9Y6Q1 641 aa12.46□□□□□ -0.41
PCDHA9-201ENST00000378122 ADGRB3O60242 1522 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 FKTNO75072 461 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 SERPINB5P36952 375 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 STAT5BP51692 787 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 KPNB1Q14974 876 aaKnown RBP12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 LRRC8BQ6P9F7 803 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 TSPAN17Q96FV3 270 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 GEMIN8Q9NWZ8 242 aaKnown RBP12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 CD274Q9NZQ7 290 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 PDHXO00330 501 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 APOA4P06727 396 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 TRIM54Q9BYV2 358 aa12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 TRIM45Q9H8W5 580 aaPredicted RBP12.46□□□□□ -0.42
PCDHA9-201ENST00000378122 MAP3K10Q02779 954 aa12.45□□□□□ -0.42
PCDHA9-201ENST00000378122 KCNMA1Q12791 1236 aa12.45□□□□□ -0.42
PCDHA9-201ENST00000378122 ZSWIM1Q9BR11 485 aa12.45□□□□□ -0.42
PCDHA9-201ENST00000378122 GRID1Q9ULK0 1009 aa12.45□□□□□ -0.42
PCDHA9-201ENST00000378122 TBKBP1A7MCY6 615 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms