RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CPXM1Q96SM3 734 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CGRRF1Q99675 332 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 ELAC2Q9BQ52 826 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TACO1Q9BSH4 297 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 DHX33Q9H6R0 707 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 KIAA1586Q9HCI6 787 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 PARVAQ9NVD7 372 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 ZC3H4Q9UPT8 1303 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TRDMT1O14717 391 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 AVILO75366 819 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 HSD17B3P37058 310 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 EIF3EP60228 445 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 FOXD4Q12950 439 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 MGAT5BQ3V5L5 792 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 FIGNQ5HY92 759 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 NOTUMQ6P988 496 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 FEZF2Q8TBJ5 459 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CCDC110Q8TBZ0 833 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TTC17Q96AE7 1141 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 PAAF1Q9BRP4 392 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 SHCBP1LQ9BZQ2 653 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TRPV6Q9H1D0 765 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 NKIRAS1Q9NYS0 192 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 EVPLQ92817 2033 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 MYH4Q9Y623 1939 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 A0A0B4J269 797 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 MAFO75444 373 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 VNN1O95497 513 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CA4P22748 312 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 BDNFP23560 247 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 TBXAS1P24557 533 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 SOX11P35716 441 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CXCR3P49682 368 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 NDUFV1P49821 464 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 OTUD4Q01804 1114 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 UBAP2Q5T6F2 1119 aaKnown RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 PPP1R26Q5T8A7 1209 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 NUGGCQ68CJ6 796 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 MTHFD1LQ6UB35 978 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 PYROXD1Q8WU10 500 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 FAM172AQ8WUF8 416 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 KAT2BQ92831 832 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 SCLYQ96I15 445 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 MBOAT7Q96N66 472 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 RBM15Q96T37 977 aaKnown RBP eCLIP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 SENP6Q9GZR1 1112 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-203ENST00000378037 ARHGAP28Q9P2N2 729 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 SLC27A5Q9Y2P5 690 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 CDY2AQ9Y6F7 541 aa8.52□□□□□ -1.05
CKAP2-203ENST00000378037 C5orf42Q9H799 3197 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 M0QYT0 321 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 CAND2O75155 1236 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 AP1G2O75843 785 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 SNAI1O95863 264 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 TGFB3P10600 412 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 GARTP22102 1010 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 RPL21P46778 160 aaKnown RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ZNF131P52739 623 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 PMS2P54278 862 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 NCKAP1LP55160 1127 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 IFI35P80217 286 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 SLMAPQ14BN4 828 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 GEN1Q17RS7 908 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 PTPN20Q4JDL3 420 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 BRSK2Q8IWQ3 736 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ABRAQ8N0Z2 381 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 TMEM40Q8WWA1 233 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 KCNK16Q96T55 309 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 DDIT4Q9NX09 232 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ATP11BQ9Y2G3 1177 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 C9IYK1 514 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 MDM4O15151 490 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 BUD23O43709 281 aaKnown RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 MICAL2O94851 1124 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 CHRNB2P17787 502 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 KCNJ6P48051 423 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 NOVP48745 357 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 PSEN2P49810 448 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 SULT1E1P49888 294 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 GJA9P57773 515 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 MXRA7P84157 204 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ADCY2Q08462 1091 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ZNF449Q6P9G9 518 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 PID1Q7Z2X4 250 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 SHC3Q92529 594 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 USP6NLQ92738 828 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 KHSRPQ92945 711 aaKnown RBP eCLIP8.51□□□□□ -1.056e-6■■□□□ 13.6
CKAP2-203ENST00000378037 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 ZBED2Q9BTP6 218 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 KRT82Q9NSB4 513 aa8.51□□□□□ -1.05
CKAP2-203ENST00000378037 KLHL8Q9P2G9 620 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-203ENST00000378037 FRMD3A2A2Y4 597 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms