RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ZNF268Q14587 947 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-202ENST00000376610 PDGFRLQ15198 375 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 SDHAF4Q5VUM1 108 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 C4orf50Q6ZRC1 276 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 FSIP1Q8NA03 581 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 TRMT2BQ96GJ1 504 aaKnown RBP19.83■□□□□ 0.77
HDAC6-202ENST00000376610 FUBP3Q96I24 572 aaKnown RBP eCLIP19.83■□□□□ 0.77
HDAC6-202ENST00000376610 TNMDQ9H2S6 317 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 EBF3Q9H4W6 596 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 TRPC7Q9HCX4 862 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 PARD6AQ9NPB6 346 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 GTF3C4Q9UKN8 822 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 ZNF233A6NK53 670 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 HRO43593 1189 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 FOXD2O60548 495 aaPredicted RBP19.82■□□□□ 0.76
HDAC6-202ENST00000376610 NOL4O94818 638 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 TGM1P22735 817 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 HOXA6P31267 233 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 AMPD3Q01432 767 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 CFAP221Q4G0U5 840 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 WDR44Q5JSH3 913 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 DPH6Q7L8W6 267 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 SCN4BQ8IWT1 228 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 HPS4Q9NQG7 708 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 INTS13Q9NVM9 706 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 SLC8A2Q9UPR5 921 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 MTMR6Q9Y217 621 aa19.82■□□□□ 0.76
HDAC6-202ENST00000376610 TRAV19A0A0A6YYK7 116 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 STX6O43752 255 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 CKMP06732 381 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 USP17L7P0C7H9 530 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 MAPRE1Q15691 268 aaKnown RBP19.81■□□□□ 0.76
HDAC6-202ENST00000376610 DUOXA2Q1HG44 320 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 TMEM196Q5HYL7 178 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 LMBRD2Q68DH5 695 aaPredicted RBP19.81■□□□□ 0.76
HDAC6-202ENST00000376610 TRIM68Q6AZZ1 485 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 WDR5BQ86VZ2 330 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 CPA6Q8N4T0 437 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 STKLD1Q8NE28 680 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 TTC16Q8NEE8 873 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 NETO1Q8TDF5 533 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 HPDLQ96IR7 371 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 MYRFLQ96LU7 910 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 FGFBP2Q9BYJ0 223 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 CUEDC2Q9H467 287 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 KIAA1586Q9HCI6 787 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 SEMA4GQ9NTN9 838 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 SPAG17Q6Q759 2223 aa19.81■□□□□ 0.76
HDAC6-202ENST00000376610 TPRP12270 2363 aaKnown RBP19.81■□□□□ 0.76
HDAC6-202ENST00000376610 SDK1Q7Z5N4 2213 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 ATG2BQ96BY7 2078 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 A0A087X0B3 334 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 TRDMT1O14717 391 aaKnown RBP19.8■□□□□ 0.76
HDAC6-202ENST00000376610 GABRDO14764 452 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 NASPP49321 788 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-202ENST00000376610 FAM160A1Q05DH4 1040 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 SRSF5Q13243 272 aaKnown RBP19.8■□□□□ 0.76
HDAC6-202ENST00000376610 MTF1Q14872 753 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 CSRP2Q16527 193 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 OSTM1Q86WC4 334 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 CXorf38Q8TB03 319 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 FAM84AQ96KN4 292 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 ZNF396Q96N95 335 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-202ENST00000376610 PKMYT1Q99640 499 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 SYT15Q9BQS2 421 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
HDAC6-202ENST00000376610 MAGEC2Q9UBF1 373 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-202ENST00000376610 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.8■□□□□ 0.76
HDAC6-202ENST00000376610 SPTLC2O15270 562 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 DRD1P21728 446 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 MAGEA11P43364 429 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 IFNAR2P48551 515 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 PDE6CP51160 858 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 ASIC1P78348 528 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 KCNB1Q14721 858 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 SOWAHAQ2M3V2 549 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 FSTL4Q6MZW2 842 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 ATP2A3Q93084 1043 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 P2RY13Q9BPV8 354 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 C2orf42Q9NWW7 574 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 DUS2Q9NX74 493 aaKnown RBP19.79■□□□□ 0.76
HDAC6-202ENST00000376610 HSPBP1Q9NZL4 362 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 CDH9Q9ULB4 789 aa19.79■□□□□ 0.76
HDAC6-202ENST00000376610 CCDC163A0A0D9SF12 145 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-202ENST00000376610 DCDC2BA2VCK2 349 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 EIF3DO15371 548 aaKnown RBP eCLIP19.78■□□□□ 0.76
HDAC6-202ENST00000376610 CCDC192P0DO97 292 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 ARSAP15289 507 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 ANXA13P27216 316 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 NR1H3Q13133 447 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 FBXO43Q4G163 708 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 VSTM1Q6UX27 236 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 PRR23CQ6ZRP0 262 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 CBWD2Q8IUF1 395 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 WDR49Q8IV35 697 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 FAM160A2Q8N612 972 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-202ENST00000376610 LINC00301Q8NCQ3 95 aa19.78■□□□□ 0.76
HDAC6-202ENST00000376610 OSCP1Q8WVF1 389 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms