RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CACNG4Q9UBN1 327 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 TCRBV7S2A1N4TA0A589 114 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 ESYT3A0FGR9 886 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 MAP2K7O14733 419 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 SSR1P43307 286 aaKnown RBP18.66■□□□□ 0.58
CTTN-203ENST00000376561 SCNN1GP51170 649 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 ADGRF2Q8IZF7 708 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 PRELID2Q8N945 189 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 MCRS1Q96EZ8 462 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 METTL5Q9NRN9 209 aaKnown RBP18.66■□□□□ 0.58
CTTN-203ENST00000376561 A0A0U1RQG5 324 aaPredicted RBP18.66■□□□□ 0.58
CTTN-203ENST00000376561 SPDYE4A6NLX3 237 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 IGFBP6P24592 240 aaPredicted RBP18.66■□□□□ 0.58
CTTN-203ENST00000376561 KATNAL2Q8IYT4 538 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 FNIP1Q8TF40 1166 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 AENQ8WTP8 325 aaKnown RBP18.66■□□□□ 0.58
CTTN-203ENST00000376561 LPIN3Q9BQK8 851 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 RSAD1Q9HA92 442 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 OGFRQ9NZT2 677 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 HESX1Q9UBX0 185 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 MTUS1Q9ULD2 1270 aa18.66■□□□□ 0.58
CTTN-203ENST00000376561 CYB561D2O14569 222 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 FSCN2O14926 492 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 PHF2O75151 1096 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 TCF4P15884 667 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 CARSP49589 748 aaKnown RBP18.65■□□□□ 0.58
CTTN-203ENST00000376561 CASP8Q14790 479 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 TRAF7Q6Q0C0 670 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 SH3TC2Q8TF17 1288 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.65■□□□□ 0.584e-11■■■■□ 26.7
CTTN-203ENST00000376561 PHF24Q9UPV7 400 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.65■□□□□ 0.58
CTTN-203ENST00000376561 E5RJQ4 531 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 TTI1O43156 1089 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 SETSIPP0DME0 302 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 WARSP23381 471 aaKnown RBP18.65■□□□□ 0.58
CTTN-203ENST00000376561 PSMA2P25787 234 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 CLCNKBP51801 687 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 LLGL1Q15334 1064 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 SIX1Q15475 284 aaPredicted RBP18.65■□□□□ 0.58
CTTN-203ENST00000376561 PMF1Q6P1K2 205 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 SLC35F5Q8WV83 523 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 CASKIN2Q8WXE0 1202 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 DNAI2Q9GZS0 605 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 MIS12Q9H081 205 aa18.65■□□□□ 0.58
CTTN-203ENST00000376561 KBTBD13C9JR72 458 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 BHMG1C9JSJ3 638 aaPredicted RBP18.64■□□□□ 0.57
CTTN-203ENST00000376561 ARVCFO00192 962 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 TULP2O00295 520 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 PODXLO00592 558 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 RARAP10276 462 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 IBSPP21815 317 aaPredicted RBP18.64■□□□□ 0.57
CTTN-203ENST00000376561 CHRNA3P32297 505 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 GJC1P36383 396 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 TRADDQ15628 312 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 CYP1B1Q16678 543 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 FAM102AQ5T9C2 384 aaPredicted RBP18.64■□□□□ 0.57
CTTN-203ENST00000376561 LRRC38Q5VT99 294 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 OSTM1Q86WC4 334 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 EMC1Q8N766 993 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 EXD1Q8NHP7 514 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 IFT81Q8WYA0 676 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 PGBD4Q96DM1 585 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 TNIP3Q96KP6 325 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■■■□ 22.4
CTTN-203ENST00000376561 PIK3R2O00459 728 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 SKIP12755 728 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 CCDC130P13994 396 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 RGS7P49802 495 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 EPHB4P54760 987 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 PDE4CQ08493 712 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 MBTPS1Q14703 1052 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 CCDC50Q8IVM0 306 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 MAGOHBQ96A72 148 aaKnown RBP18.64■□□□□ 0.57
CTTN-203ENST00000376561 SENP8Q96LD8 212 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 GDAP1L1Q96MZ0 367 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 SLC4A5Q9BY07 1137 aa18.64■□□□□ 0.57
CTTN-203ENST00000376561 RPL9P32969 192 aaKnown RBP18.63■□□□□ 0.57
CTTN-203ENST00000376561 TNNT3P45378 269 aaPredicted RBP18.63■□□□□ 0.57
CTTN-203ENST00000376561 DR1Q01658 176 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 ATP13A4Q4VNC1 1196 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 WSCD1Q658N2 575 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 OR6B2Q6IFH4 312 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 FAM183BPQ6ZVS7 135 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 ANKRD52Q8NB46 1076 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 STK32AQ8WU08 396 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 HERPUD2Q9BSE4 406 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 UBN1Q9NPG3 1134 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 NFU1Q9UMS0 254 aa18.63■□□□□ 0.57
CTTN-203ENST00000376561 TDRD15B5MCY1 1934 aaKnown RBP18.63■□□□□ 0.57
CTTN-203ENST00000376561 CASTOR2A6NHX0 329 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 GABRDO14764 452 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 PLA2G4AP47712 749 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 DHX34Q14147 1143 aaKnown RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 EMBQ6PCB8 327 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 TMEM110Q86TL2 294 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 ECHDC2Q86YB7 292 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 B3GALNT2Q8NCR0 500 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms