RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 ABCA1O95477 2261 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 SMG6Q86US8 1419 aaKnown RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 MYH7P12883 1935 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 TRPC5OSA6NMA1 111 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 FARP2O94887 1054 aaPredicted RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 PDXDC2PQ6P474 469 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 MFSD6Q6ZSS7 791 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 SPATA21Q7Z572 469 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 VN1R5Q7Z5H4 357 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 DAW1Q8N136 415 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 ELMO1Q92556 727 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 KCNB2Q92953 911 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 TRAPPC9Q96Q05 1148 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 NUAK2Q9H093 628 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 CNNM2Q9H8M5 875 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 GDPD2Q9HCC8 539 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 POLR3EQ9NVU0 708 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 AHSPQ9NZD4 102 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 FBXO40Q9UH90 709 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 GRIP1Q9Y3R0 1128 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 USP15Q9Y4E8 981 aaPredicted RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 MROH7Q68CQ1 1323 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 PSMD14O00487 310 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 PRPF4O43172 522 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 MXD4Q14582 209 aaPredicted RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 KRT24Q2M2I5 525 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 C12orf60Q5U649 245 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 TYW3Q6IPR3 259 aaKnown RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 PPP1R2P3Q6NXS1 205 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 BORAQ6PGQ7 559 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 TRIM74Q86UV6 250 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 TRIM73Q86UV7 250 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 MICU3Q86XE3 530 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 GUF1Q8N442 669 aaKnown RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 NEK9Q8TD19 979 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 DNAJA4Q8WW22 397 aaPredicted RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 BAP1Q92560 729 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 SENP6Q9GZR1 1112 aaPredicted RBP6.18□□□□□ -1.42
SCN2A-202ENST00000375427 ZMYND12Q9H0C1 365 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 ECHDC1Q9NTX5 307 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 SLC12A4Q9UP95 1085 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 ZNF175Q9Y473 711 aa6.18□□□□□ -1.42
SCN2A-202ENST00000375427 UACAQ9BZF9 1416 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 BHLHE40O14503 412 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 PTPREP23469 700 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 MARK3P27448 753 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 GCLMP48507 274 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 ANXA11P50995 505 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 HNRNPH2P55795 449 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 RPS7P62081 194 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 MAP4K2Q12851 820 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 ITGA9Q13797 1035 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 RYBPQ8N488 228 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 SRFBP1Q8NEF9 429 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 OXCT2Q9BYC2 517 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 MAGEB5Q9BZ81 275 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 ZNF334Q9HCZ1 680 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 C1orf112Q9NSG2 853 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 EIF2B4Q9UI10 523 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 TIMM8BQ9Y5J9 83 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 RBM47A0AV96 593 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 DDX39AO00148 427 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 KRT34O76011 436 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 NCK1P16333 377 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 GADD45AP24522 165 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 FABP6P51161 128 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 P3H1Q32P28 736 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 ZNF589Q86UQ0 364 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 AGGF1Q8N302 714 aaeCLIP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 TCP11L2Q8N4U5 519 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 ANKRD44Q8N8A2 993 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 NXNL1Q96CM4 212 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 LURAP1Q96LR2 239 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 HERC2P3Q9BVR0 1158 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 APOL5Q9BWW9 433 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 CABP5Q9NP86 173 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 DACT1Q9NYF0 836 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 SIK3Q9Y2K2 1263 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 MYH3P11055 1940 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 RRN3P2A6NIE6 340 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 SPTLC2O15270 562 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 KDM4BO94953 1096 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 PRKCAP17252 672 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 CCNA2P20248 432 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 TYK2P29597 1187 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 CMPK1P30085 196 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 UBE3CQ15386 1083 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 HAGHLQ6PII5 290 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 STOX1Q6ZVD7 989 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 MTSS1LQ765P7 747 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 GALNT4Q8N4A0 578 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 C12orf45Q8N5I9 185 aaPredicted RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 SLC12A5Q9H2X9 1139 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 DUSP22Q9NRW4 184 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 PPP4R1LQ9P1A2 415 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 RUVBL1Q9Y265 456 aaKnown RBP6.17□□□□□ -1.42
SCN2A-202ENST00000375427 PCDHGA4Q9Y5G9 962 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 CACNA1DQ01668 2161 aa6.17□□□□□ -1.42
SCN2A-202ENST00000375427 NPHP3Q7Z494 1330 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms