RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GABBR1Q9UBS5 961 aa12.75□□□□□ -0.37
C9orf3-203ENST00000375315 SMG5Q9UPR3 1016 aaKnown RBP12.75□□□□□ -0.37
C9orf3-203ENST00000375315 TBX3O15119 743 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 PIM1P11309 404 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 HNRNPDQ14103 355 aaKnown RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 AADACL2Q6P093 401 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 TSHZ1Q6ZSZ6 1077 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 OTOAQ7RTW8 1153 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 FAM161BQ96MY7 647 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 HSD17B14Q9BPX1 270 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 POLR3CQ9BUI4 534 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 ASIC3Q9UHC3 531 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 A0A0G2JLL6 359 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 TRIM43BA6NCK2 446 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 PDHXO00330 501 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 NDC80O14777 642 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 PRPF4O43172 522 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■■■□ 25.5
C9orf3-203ENST00000375315 STRNO43815 780 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 RGS20O76081 388 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 OR6B1O95007 311 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 CDK4P11802 303 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 FUT4P22083 530 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 GRIA2P42262 883 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 SLC18A1P54219 525 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 SP2Q02086 613 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 GRM2Q14416 872 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 CYP1B1Q16678 543 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 TRMT5Q32P41 509 aaKnown RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 C1orf228Q6PIY5 440 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 PRRT2Q7Z6L0 340 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-203ENST00000375315 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 CEP70Q8NHQ1 597 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 ABHD8Q96I13 439 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 TTC1Q99614 292 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 KIFC3Q9BVG8 833 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 CYLDQ9NQC7 956 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 TAS2R1Q9NYW7 299 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 TRAF3IP3Q9Y228 551 aa12.74□□□□□ -0.37
C9orf3-203ENST00000375315 AMPD1P23109 780 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 PON1P27169 355 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 STAT1P42224 750 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 RAP1GDS1P52306 607 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 MTTPP55157 894 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 KCTD2Q14681 263 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 ODR4Q5SWX8 454 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 MFSD4BQ5TF39 518 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 OR6Y1Q8NGX8 325 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 NINJ2Q9NZG7 142 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 TMED5Q9Y3A6 229 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 ASTN1O14525 1302 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 DHX15O43143 795 aaKnown RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 CETPP11597 493 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 CHKAP35790 457 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 CAV1Q03135 178 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 RINLQ6ZS11 566 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 NET1Q7Z628 596 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 CCDC110Q8TBZ0 833 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 DENND1AQ8TEH3 1009 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 COPS5Q92905 334 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 PRDM16Q9HAZ2 1276 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 DNAJC17Q9NVM6 304 aaKnown RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 DDX18Q9NVP1 670 aaKnown RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 ZDHHC7Q9NXF8 308 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 DCTN4Q9UJW0 460 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 ALG6Q9Y672 507 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 TISP43B9A030 160 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 MAGEC1O60732 1142 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 PORP16435 677 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 KCNJ1P48048 391 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 VPS41P49754 854 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 FAM102BQ5T8I3 360 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 RBM44Q6ZP01 1051 aaKnown RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 TRIM67Q6ZTA4 783 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 FBXO16Q8IX29 292 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 LNX1Q8TBB1 728 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 CYTH2Q99418 400 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 OSBPL8Q9BZF1 889 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 HEY2Q9UBP5 337 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 R3HDM2Q9Y2K5 976 aaKnown RBP12.73□□□□□ -0.37
C9orf3-203ENST00000375315 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
C9orf3-203ENST00000375315 PDE5AO76074 875 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 OSBPP22059 807 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 HOXD12P35452 270 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 RPL5P46777 297 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms