RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 STILQ15468 1287 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
UBR4-203ENST00000375225 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 P3H1Q32P28 736 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 DUSP28Q4G0W2 176 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 KAZNQ674X7 775 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 EXOC3L1Q86VI1 746 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 MDM1Q8TC05 714 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 USP6NLQ92738 828 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 COPS5Q92905 334 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
UBR4-203ENST00000375225 GRAMD1AQ96CP6 724 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 ZNF317Q96PQ6 595 aaPredicted RBP12.88□□□□□ -0.35
UBR4-203ENST00000375225 ZIC5Q96T25 663 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 RBM15Q96T37 977 aaKnown RBP eCLIP12.88□□□□□ -0.35
UBR4-203ENST00000375225 PRMT1Q99873 361 aaKnown RBP12.88□□□□□ -0.35
UBR4-203ENST00000375225 KCNK9Q9NPC2 374 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
UBR4-203ENST00000375225 R3HDM2Q9Y2K5 976 aaKnown RBP12.88□□□□□ -0.35
UBR4-203ENST00000375225 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 TCRBV5S1A1TA0A578 114 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 AOC2O75106 756 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 SUN1O94901 812 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 KRT19P08727 400 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 CYP2B6P20813 491 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 GBP2P32456 591 aaPredicted RBP12.87□□□□□ -0.35
UBR4-203ENST00000375225 MAGEA4P43358 317 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 ASPAP45381 313 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 VPS41P49754 854 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 ARSEP51690 589 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 IL9RQ01113 521 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 KYNUQ16719 465 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 TDRPQ86YL5 185 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
UBR4-203ENST00000375225 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
UBR4-203ENST00000375225 CCDC13Q8IYE1 715 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
UBR4-203ENST00000375225 DDX23Q9BUQ8 820 aaKnown RBP12.87□□□□□ -0.35
UBR4-203ENST00000375225 BCO2Q9BYV7 579 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 VRTNQ9H8Y1 702 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 PTPRHQ9HD43 1115 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 ASNSD1Q9NWL6 643 aa12.87□□□□□ -0.35
UBR4-203ENST00000375225 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 SGK1O00141 431 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 ABLIM1O14639 778 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 HMGCRP04035 888 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 EDN1P05305 212 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 CFHP08603 1231 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 VDRP11473 427 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 BRAFP15056 766 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 TSHRP16473 764 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 ATP2A2P16615 1042 aaKnown RBP12.86□□□□□ -0.35
UBR4-203ENST00000375225 STX2P32856 288 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 PSMC1P62191 440 aaKnown RBP12.86□□□□□ -0.35
UBR4-203ENST00000375225 RPL7AP62424 266 aaKnown RBP12.86□□□□□ -0.35
UBR4-203ENST00000375225 PLCB3Q01970 1234 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 LLGL1Q15334 1064 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 C2CD6Q53TS8 623 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 MFSD7Q6UXD7 560 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 PIGWQ7Z7B1 504 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 ADPGKQ9BRR6 497 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 CDT1Q9H211 546 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 ADAM7Q9H2U9 754 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 SAYSD1Q9NPB0 183 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 NXF1Q9UBU9 619 aaKnown RBP12.86□□□□□ -0.35
UBR4-203ENST00000375225 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
UBR4-203ENST00000375225 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
UBR4-203ENST00000375225 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.85□□□□□ -0.35
UBR4-203ENST00000375225 EXOC1LA0A1B0GW35 172 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 STAU1O95793 577 aaKnown RBP12.85□□□□□ -0.35
UBR4-203ENST00000375225 SMPD1P17405 629 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 CDKN2BP42772 138 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 PSMC4P43686 418 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 ARL4CP56559 192 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 GPS1Q13098 491 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 RASA2Q15283 850 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 QPCTQ16769 361 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 ZNF394Q53GI3 561 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 LLGL2Q6P1M3 1020 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 ANKS1BQ7Z6G8 1248 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 RSAD2Q8WXG1 361 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 FAM84AQ96KN4 292 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 MAK16Q9BXY0 300 aaKnown RBP12.85□□□□□ -0.35
UBR4-203ENST00000375225 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
UBR4-203ENST00000375225 FETUBQ9UGM5 382 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms