RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ABCG1P45844 678 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 TEFQ10587 303 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 CMIPQ8IY22 773 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 LSG1Q9H089 658 aaKnown RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 MYO6Q9UM54 1294 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 CBY1Q9Y3M2 126 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 GPR89AB7ZAQ6 455 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 MAP3K13O43283 966 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 GPR89BP0CG08 455 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CHMLP26374 656 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 KLRK1P26718 216 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 NUP62P37198 522 aaPredicted RBP9.49□□□□□ -0.89
UBR4-201ENST00000375218 MAGEA9P43362 315 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 KRT85P78386 507 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 HTRA1Q92743 480 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 USP7Q93009 1102 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CUL5Q93034 780 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 VPS33AQ96AX1 596 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 NOX5Q96PH1 765 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ARHGAP39Q9C0H5 1083 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 VAV3Q9UKW4 847 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 MAST2Q6P0Q8 1798 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 TRIM38O00635 465 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 PEX11AO75192 247 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 NTSR2O95665 410 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 FTCDO95954 541 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 GNAI2P04899 355 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 JAK1P23458 1154 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 FXR1P51114 621 aaKnown RBP eCLIP9.49□□□□□ -0.897e-7■■■□□ 16.9
UBR4-201ENST00000375218 SCNN1GP51170 649 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CBX3Q13185 183 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CLVS2Q5SYC1 327 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 RRAGBQ5VZM2 374 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 NLRP9Q7RTR0 991 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 HUS1BQ8NHY5 278 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 TNFRSF25Q93038 417 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 IQCDQ96DY2 449 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 FAM89AQ96GI7 184 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CAMK1GQ96NX5 476 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 SPON1Q9HCB6 807 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ATAD3AQ9NVI7 634 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CHORDC1Q9UHD1 332 aaPredicted RBP9.49□□□□□ -0.89
UBR4-201ENST00000375218 SLC39A10Q9ULF5 831 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 TMEM221A6NGB7 291 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 PSMD14O00487 310 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 HLA-DRAP01903 254 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
UBR4-201ENST00000375218 ALDH4A1P30038 563 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ADORA1P30542 326 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 TXLNAP40222 546 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CABP4P57796 275 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CEBPZQ03701 1054 aaKnown RBP9.49□□□□□ -0.89
UBR4-201ENST00000375218 RFTN1Q14699 578 aaPredicted RBP9.49□□□□□ -0.89
UBR4-201ENST00000375218 STARD3Q14849 445 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD20A4Q4UJ75 823 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD20A8PQ5CZ79 823 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD20A2Q5SQ80 823 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD20A1Q5TYW2 823 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD20A3Q5VUR7 823 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ERICH5Q6P6B1 374 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 GRAMD1CQ8IYS0 662 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CAMKK1Q8N5S9 505 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 ZDHHC15Q96MV8 337 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 FAM129BQ96TA1 746 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 TTC1Q99614 292 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 PALMDQ9NP74 551 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 CRTAC1Q9NQ79 661 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 C1orf112Q9NSG2 853 aa9.49□□□□□ -0.89
UBR4-201ENST00000375218 GREB1LQ9C091 1923 aaPredicted RBP9.49□□□□□ -0.89
UBR4-201ENST00000375218 A8MV72 311 aaPredicted RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 F8W810 466 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 SOX9P48436 509 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 ATXN3P54252 364 aaPredicted RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 PM20D1Q6GTS8 502 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 BICDL1Q6ZP65 573 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 SLC15A3Q8IY34 581 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 FAM227BQ96M60 508 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 PKP4Q99569 1192 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 OR10A4Q9H209 315 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 ADPRHL2Q9NX46 363 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 HYPKQ9NX55 129 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 STK32BQ9NY57 414 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 GSAPA4D1B5 854 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 FAM86C2PA6NEL3 165 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 PSMD9O00233 223 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 TRDMT1O14717 391 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 SRGAP3O43295 1099 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 B4GALT4O60513 344 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 ABCB1P08183 1280 aaPredicted RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 EPB41P11171 864 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms