RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 SND1Q7KZF4 910 aaKnown RBP eCLIP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GSPT2Q8IYD1 628 aaKnown RBP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 C12orf29Q8N999 325 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SLC43A3Q8NBI5 491 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 CD99L2Q8TCZ2 262 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 IPO4Q8TEX9 1081 aaKnown RBP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 IFT81Q8WYA0 676 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 RBM41Q96IZ5 413 aaKnown RBP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HINFPQ9BQA5 517 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 AGO3Q9H9G7 860 aaKnown RBP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 DDX56Q9NY93 547 aaKnown RBP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FEZ2Q9UHY8 353 aaPredicted RBP14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 RASAL2Q9UJF2 1139 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 PADI3Q9ULW8 664 aa14.7□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 A0A0U1RQF3 1178 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TCRBV7S2A1N4TA0A589 114 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ESYT3A0FGR9 886 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GJB6O95452 261 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 PAX3P23760 479 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 RPL9P32969 192 aaKnown RBP14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GNL1P36915 607 aaPredicted RBP14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SCNN1AP37088 669 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 THPOP40225 353 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TNNT3P45378 269 aaPredicted RBP14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 NFX1Q12986 1120 aaKnown RBP14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TRADDQ15628 312 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 CCDC137Q6PK04 289 aaKnown RBP14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SYDE1Q6ZW31 735 aaPredicted RBP14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ARCQ7LC44 396 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ACOT1Q86TX2 421 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 JAMLQ86YT9 394 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ZDHHC17Q8IUH5 632 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ANKRD52Q8NB46 1076 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 APPL2Q8NEU8 664 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 RAET1EQ8TD07 263 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 OSBPL8Q9BZF1 889 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SYNCQ9H7C4 482 aa14.69□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 A8MXQ7 604 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GABRDO14764 452 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HUS1O60921 280 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 THP07101 528 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SKIP12755 728 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 PCK1P35558 622 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HSPA9P38646 679 aaKnown RBP14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 CCNG2Q16589 344 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 LHX8Q68G74 356 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TTC27Q6P3X3 843 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FAM43BQ6ZT52 329 aaPredicted RBP14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ADAT2Q7Z6V5 191 aaKnown RBP14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TTC30AQ86WT1 665 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SLAIN1Q8ND83 568 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 OR6B3Q8NGW1 331 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 UBA3Q8TBC4 463 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TNIP3Q96KP6 325 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SEZ6LQ9BYH1 1024 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 UBN1Q9NPG3 1134 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HESX1Q9UBX0 185 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TJP2Q9UDY2 1190 aa14.68□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 INPPL1O15357 1258 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 DAPK3O43293 454 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 KRT7P08729 469 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 CTSHP09668 335 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FGFR1P11362 822 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ZNF143P52747 638 aaPredicted RBP14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SLC25A11Q02978 314 aaKnown RBP14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 LPIN1Q14693 890 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TAZQ16635 292 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GOLGA7BQ2TAP0 167 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SPDYCQ5MJ68 293 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 DRICH1Q6PGQ1 229 aaPredicted RBP14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 AGMOQ6ZNB7 445 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 IQCKQ8N0W5 287 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ARFGAP1Q8N6T3 406 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 JOSD2Q8TAC2 188 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SPATA18Q8TC71 538 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 PKNOX2Q96KN3 472 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ZFP42Q96MM3 310 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SCN1AP35498 2009 aa14.67□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 ARL5CA6NH57 179 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 C2CD4BA6NLJ0 364 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 LRCH4O75427 683 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FAM153BP0C7A2 387 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 RALAP11233 206 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 PSMA2P25787 234 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FAM193AP78312 1265 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HADHQ16836 314 aaKnown RBP14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FAM153CQ494X1 144 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 DAB2IPQ5VWQ8 1189 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 PMF1Q6P1K2 205 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 TMEM86AQ8N2M4 240 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 FAM71BQ8TC56 605 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 LRRC45Q96CN5 670 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HSFY1Q96LI6 401 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 SLITRK1Q96PX8 696 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 GAD1Q99259 594 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 NCAPGQ9BPX3 1015 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 HERPUD2Q9BSE4 406 aa14.66□□□□□ -0.06
NIPSNAP3A-201ENST00000374767 CNPY3Q9BT09 278 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms