RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 EDRF1Q3B7T1 1238 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 ERI1Q8IV48 349 aaKnown RBP10.67□□□□□ -0.7
CD28-202ENST00000374481 RNF148Q8N7C7 305 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 CCNYL1Q8N7R7 359 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 KCTD6Q8NC69 237 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 TMEM109Q9BVC6 243 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 TAS2R1Q9NYW7 299 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 C6orf203Q9P0P8 240 aaPredicted RBP10.67□□□□□ -0.7
CD28-202ENST00000374481 ZNF652Q9Y2D9 606 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 UBE4BO95155 1302 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 MYO3BQ8WXR4 1341 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 MROH2AA6NES4 1674 aa10.67□□□□□ -0.7
CD28-202ENST00000374481 FAM25AB3EWG3 89 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 FAM25CB3EWG5 89 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 FAM25GB3EWG6 89 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 OR6B1O95007 311 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 KRT6AP02538 564 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 KRT6BP04259 564 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 PCCAP05165 728 aaPredicted RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 CREB1P16220 341 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 NELFEP18615 380 aaKnown RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 SERPINB5P36952 375 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 CMPK2Q5EBM0 449 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 IRF2BP1Q8IU81 584 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 TCAIMQ8N3R3 496 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 RBM15BQ8NDT2 890 aaKnown RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 DCUN1D1Q96GG9 259 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 C8orf37Q96NL8 207 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 APEX2Q9UBZ4 518 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 PCDHB4Q9Y5E5 795 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 CDY2AQ9Y6F7 541 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 CDY1Q9Y6F8 540 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 SAC3D1A6NKF1 404 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 ZBTB39O15060 712 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 MAGEB3O15480 346 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 CLOCKO15516 846 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 WDR47O94967 919 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 LDHBP07195 334 aaKnown RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 RALAP11233 206 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 CCNA2P20248 432 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 SCARF1Q14162 830 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 TMEM214Q6NUQ4 689 aaKnown RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 APTXQ7Z2E3 356 aaKnown RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 PQLC1Q8N2U9 271 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 TUBGCP3Q96CW5 907 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 GTSE1Q9NYZ3 720 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 CENPXA8MT69 81 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 H3BNX3 289 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 SEMA3DO95025 777 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 TTC39BQ5VTQ0 682 aaPredicted RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 FBXW8Q8N3Y1 598 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 GABPB2Q8TAK5 448 aaPredicted RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 NSMCE3Q96MG7 304 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 EFCAB1Q9HAE3 211 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 SQORQ9Y6N5 450 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 FRMPD2Q68DX3 1309 aaPredicted RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 PXDNLA1KZ92 1463 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 PDXKO00764 312 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 GSTA4O15217 222 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 TLR3O15455 904 aaKnown RBP10.66□□□□□ -0.7
CD28-202ENST00000374481 GNAZP19086 355 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 IL12RB1P42701 662 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 OR52E8Q6IFG1 317 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 PIGSQ96S52 555 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 EYA3Q99504 573 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 PNPLA3Q9NST1 481 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 KLHL11Q9NVR0 708 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 GRID1Q9ULK0 1009 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 IPPQ9Y573 584 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
CD28-202ENST00000374481 SF3B3Q15393 1217 aaKnown RBP10.65□□□□□ -0.7
CD28-202ENST00000374481 MIIPQ5JXC2 388 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 PDPK2PQ6A1A2 396 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 ZNF280DQ6N043 979 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 ELMSAN1Q6PJG2 1045 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 C11orf74Q86VG3 221 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 KYQ8NBH2 561 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 BAP1Q92560 729 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 USP13Q92995 863 aaPredicted RBP10.65□□□□□ -0.7
CD28-202ENST00000374481 MED15Q96RN5 788 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 RPRD1BQ9NQG5 326 aaKnown RBP10.65□□□□□ -0.7
CD28-202ENST00000374481 LNPEPQ9UIQ6 1025 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 NIP7Q9Y221 180 aaKnown RBP eCLIP10.65□□□□□ -0.7
CD28-202ENST00000374481 AFG3L2Q9Y4W6 797 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 SNPHO15079 494 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 RGL2O15211 777 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 SERPINB2P05120 415 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 PON1P27169 355 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 KLHL35Q6PF15 583 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 ZNF555Q8NEP9 628 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 DIS3LQ8TF46 1054 aaKnown RBP10.65□□□□□ -0.7
CD28-202ENST00000374481 CLK4Q9HAZ1 481 aaKnown RBP10.65□□□□□ -0.7
CD28-202ENST00000374481 ABCA9Q8IUA7 1624 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 GSG1L2A8MUP6 293 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 H0YGN5 161 aa10.65□□□□□ -0.7
CD28-202ENST00000374481 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
CD28-202ENST00000374481 PIK3CDO00329 1044 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms