RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 TRIM68Q6AZZ1 485 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 PID1Q7Z2X4 250 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 FAM131BQ86XD5 332 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 C12orf29Q8N999 325 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 EXD1Q8NHP7 514 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 DNAJB3Q8WWF6 145 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 TTC25Q96NG3 672 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 CEP41Q9BYV8 373 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 IQANK1A0A1B0GTG1 560 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 CENPCQ03188 943 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
CLIC4-201ENST00000374379 TTC27Q6P3X3 843 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 PDZD4Q76G19 769 aaPredicted RBP14.21□□□□□ -0.13
CLIC4-201ENST00000374379 C12orf56Q8IXR9 622 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 ZNF516Q92618 1163 aa14.21□□□□□ -0.13
CLIC4-201ENST00000374379 APOBEC3GQ9HC16 384 aaKnown RBP14.21□□□□□ -0.13
CLIC4-201ENST00000374379 TNRC6CQ9HCJ0 1690 aaKnown RBP14.21□□□□□ -0.14
CLIC4-201ENST00000374379 MAFO75444 373 aaPredicted RBP14.21□□□□□ -0.14
CLIC4-201ENST00000374379 BANF1O75531 89 aa14.21□□□□□ -0.14
CLIC4-201ENST00000374379 GNL1P36915 607 aaPredicted RBP14.21□□□□□ -0.14
CLIC4-201ENST00000374379 NETO2Q8NC67 525 aa14.21□□□□□ -0.14
CLIC4-201ENST00000374379 ACO2Q99798 780 aaKnown RBP14.21□□□□□ -0.14
CLIC4-201ENST00000374379 NOCTQ9UK39 431 aaKnown RBP14.21□□□□□ -0.14
CLIC4-201ENST00000374379 USP18Q9UMW8 372 aa14.21□□□□□ -0.14
CLIC4-201ENST00000374379 NFASCO94856 1347 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 ARHGAP42A6NI28 874 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 O00370 1275 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 GAS2O43903 313 aaKnown RBP14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SRGAP2BP0DMP2 458 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 PECAM1P16284 738 aaPredicted RBP14.2□□□□□ -0.14
CLIC4-201ENST00000374379 PCK1P35558 622 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 GRIK4Q16099 956 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 DUPD1Q68J44 220 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 HASPINQ8TF76 798 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 IFT122Q9HBG6 1241 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 MARCOQ9UEW3 520 aaPredicted RBP14.2□□□□□ -0.14
CLIC4-201ENST00000374379 FIS1Q9Y3D6 152 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 A0A1B0GUL6 1792 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 LPXNO60711 386 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 KRT37O76014 449 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 TTC4O95801 387 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SSTR1P30872 391 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SLC12A2P55011 1212 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 CCNG2Q16589 344 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SLC39A4Q6P5W5 647 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SYDE1Q6ZW31 735 aaPredicted RBP14.2□□□□□ -0.14
CLIC4-201ENST00000374379 METTL23Q86XA0 190 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 FAM172AQ8WUF8 416 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 ABCA3Q99758 1704 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 ATP9BO43861 1147 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SULT1E1P49888 294 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 BEX3Q00994 111 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SEPT6Q14141 434 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 SPOUT1Q5T280 376 aaKnown RBP14.2□□□□□ -0.14
CLIC4-201ENST00000374379 NXNQ6DKJ4 435 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 ABI1Q8IZP0 508 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 AGR3Q8TD06 166 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 FIZ1Q96SL8 496 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 VPS11Q9H270 941 aa14.2□□□□□ -0.14
CLIC4-201ENST00000374379 E5RJQ4 531 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 OVGP1Q12889 678 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 PARK7Q99497 189 aaKnown RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 PPP1R12CQ9BZL4 782 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 DHX33Q9H6R0 707 aaKnown RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 ETNK1Q9HBU6 452 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 MICAL2O94851 1124 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 CORO7P57737 925 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 DCAF12L1Q5VU92 463 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 NOTUMQ6P988 496 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 SPATA21Q7Z572 469 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 USP33Q8TEY7 942 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 ZC3H7BQ9UGR2 993 aaKnown RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 EIF4E1BA6NMX2 242 aaKnown RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 KRT4P19013 534 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 KCNA3P22001 575 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 NAALADL1Q9UQQ1 740 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 FAM47DPA6NHR8 397 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 C4BPAP04003 597 aaKnown RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 MIPP30301 263 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 NFIL3Q16649 462 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 RFX8Q6ZV50 586 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 FBXO36Q8NEA4 188 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 ACTR5Q9H9F9 607 aaPredicted RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 NPHS2Q9NP85 383 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 AVENQ9NQS1 362 aaPredicted RBP14.19□□□□□ -0.14
CLIC4-201ENST00000374379 WHRNQ9P202 907 aa14.19□□□□□ -0.14
CLIC4-201ENST00000374379 ARIH2O95376 493 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 KLHL38Q2WGJ6 581 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 JOSD2Q8TAC2 188 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 ZNF560Q96MR9 790 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 GPR20Q99678 358 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 SHANK3Q9BYB0 1731 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 RSAD1Q9HA92 442 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 MAPK13O15264 365 aa14.18□□□□□ -0.14
CLIC4-201ENST00000374379 ASS1P00966 412 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms