RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
HDAC8-202ENST00000373556 PAPSS2O95340 614 aaPredicted RBP17.31■□□□□ 0.36
HDAC8-202ENST00000373556 ARSAP15289 507 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 DDX6P26196 483 aaKnown RBP eCLIP17.31■□□□□ 0.36
HDAC8-202ENST00000373556 HOXD13P35453 343 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 RUNX3Q13761 415 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 E2F4Q16254 413 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 MON1AQ86VX9 555 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 LONP2Q86WA8 852 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 SPATA2LQ8IUW3 424 aaPredicted RBP17.31■□□□□ 0.36
HDAC8-202ENST00000373556 SCN4BQ8IWT1 228 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 CHFRQ96EP1 664 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 TNMDQ9H2S6 317 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 ZMYM5Q9UJ78 669 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
HDAC8-202ENST00000373556 SPTBN2O15020 2390 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 RALGAPA1Q6GYQ0 2036 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 GREB1Q4ZG55 1949 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 ZNF233A6NK53 670 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-202ENST00000373556 GABRDO14764 452 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 SPTLC2O15270 562 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 ATP2C2O75185 946 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 NOL4O94818 638 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 TNNC2P02585 160 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 LHX1P48742 406 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 PSMC1P62191 440 aaKnown RBP17.3■□□□□ 0.36
HDAC8-202ENST00000373556 LMNB2Q03252 620 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 FOXD4L5Q5VV16 416 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-202ENST00000373556 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 STXBP4Q6ZWJ1 553 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 SYNPOQ8N3V7 929 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 KBTBD7Q8WVZ9 684 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 FOXD4L4Q8WXT5 416 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-202ENST00000373556 DHX58Q96C10 678 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 HPDLQ96IR7 371 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 CYP2S1Q96SQ9 504 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 TRIM9Q9C026 710 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 KIF9Q9HAQ2 790 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 KBTBD4Q9NVX7 518 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 HSPBP1Q9NZL4 362 aa17.3■□□□□ 0.36
HDAC8-202ENST00000373556 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
HDAC8-202ENST00000373556 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
HDAC8-202ENST00000373556 PRR5-ARHGAP8B1AHC4 643 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 KIAA0391O15091 583 aaKnown RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 RETP07949 1114 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 LMO2P25791 158 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 PCSK1P29120 753 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 PXNP49023 591 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 ATXN1P54253 815 aaKnown RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 ASIC1P78348 528 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 ARHGAP8P85298 464 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 MYO1EQ12965 1108 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 NAIF1Q69YI7 327 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 CC2D1AQ6P1N0 951 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 TRMT2BQ96GJ1 504 aaKnown RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 SYT15Q9BQS2 421 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 CDV3Q9UKY7 258 aaKnown RBP17.29■□□□□ 0.36
HDAC8-202ENST00000373556 PTPRDP23468 1912 aa17.29■□□□□ 0.36
HDAC8-202ENST00000373556 HELZP42694 1942 aaKnown RBP17.28■□□□□ 0.36
HDAC8-202ENST00000373556 PDGFRBP09619 1106 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 GRSF1Q12849 480 aaKnown RBP eCLIP17.28■□□□□ 0.36
HDAC8-202ENST00000373556 ZNF268Q14587 947 aaPredicted RBP17.28■□□□□ 0.36
HDAC8-202ENST00000373556 DUOXA2Q1HG44 320 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 FAM171BQ6P995 826 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 CEP68Q76N32 757 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 LIMS2Q7Z4I7 341 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 RDH13Q8NBN7 331 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 SPATA18Q8TC71 538 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 MYLPFQ96A32 169 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 MYRFLQ96LU7 910 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 BACH2Q9BYV9 841 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 FBRSL1Q9HCM7 1045 aaKnown RBP17.28■□□□□ 0.36
HDAC8-202ENST00000373556 CRTAC1Q9NQ79 661 aa17.28■□□□□ 0.36
HDAC8-202ENST00000373556 POLR3BQ9NW08 1133 aaPredicted RBP17.28■□□□□ 0.36
HDAC8-202ENST00000373556 DCDC2BA2VCK2 349 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 C2orf78A6NCI8 922 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 SOBPA7XYQ1 873 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 TRDMT1O14717 391 aaKnown RBP17.27■□□□□ 0.36
HDAC8-202ENST00000373556 PPP6R2O75170 966 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 EGFP01133 1207 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 CKMP06732 381 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 SDHBP21912 280 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 CASP1P29466 404 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 CNR2P34972 360 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 MTF1Q14872 753 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 SURF1Q15526 300 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.36
HDAC8-202ENST00000373556 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
HDAC8-202ENST00000373556 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms