RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 HYAL1Q12794 435 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 FOXR1Q6PIV2 292 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 PIK3R5Q8WYR1 880 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 RXFP1Q9HBX9 757 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 SIK3Q9Y2K2 1263 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 SSU72P8A0A1W2PR75 194 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 NRIP1P48552 1158 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 DUSP6Q16828 381 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 SV2CQ496J9 727 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 EMC10Q5UCC4 262 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 RBM23Q86U06 439 aaKnown RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 SPATS2Q86XZ4 545 aaKnown RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 SPATA4Q8NEY3 305 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 IPO4Q8TEX9 1081 aaKnown RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 CDCA3Q99618 268 aaPredicted RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.78■■□□□ 1.08
SYNC-201ENST00000373484 PCDHB8Q9UN66 801 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 BRWD1Q9NSI6 2320 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 PER2O15055 1255 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 C4BPAP04003 597 aaKnown RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 CNPP09543 421 aaKnown RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 IRAK1P51617 712 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 MAPK8IP2Q13387 824 aaPredicted RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 MAN2A1Q16706 1144 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 VWA3BQ502W6 1294 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 PDXDC1Q6P996 788 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 PRSS55Q6UWB4 352 aaPredicted RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 LNX1Q8TBB1 728 aaPredicted RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 SYN2Q92777 582 aaPredicted RBP21.78■■□□□ 1.08
SYNC-201ENST00000373484 SENP8Q96LD8 212 aa21.78■■□□□ 1.08
SYNC-201ENST00000373484 TRIM49P0CI25 452 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 TRIM49CP0CI26 452 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 PAFAH1B1P43034 410 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 COL19A1Q14993 1142 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 PSMD5Q16401 504 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 TDRD10Q5VZ19 366 aaKnown RBP21.77■■□□□ 1.08
SYNC-201ENST00000373484 DSTYKQ6XUX3 929 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.77■■□□□ 1.08
SYNC-201ENST00000373484 KLHL5Q96PQ7 755 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 OSBPL9Q96SU4 736 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 EMILIN2Q9BXX0 1053 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 FNIP2Q9P278 1114 aa21.77■■□□□ 1.08
SYNC-201ENST00000373484 KPNA7A9QM74 516 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 ZNF263O14978 683 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 CST3P01034 146 aaPredicted RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 CREMQ03060 361 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 ZACNQ401N2 412 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 VARS2Q5ST30 1063 aaKnown RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 C15orf39Q6ZRI6 1047 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 ANKS3Q6ZW76 656 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 FRMD5Q7Z6J6 570 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 APPL2Q8NEU8 664 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 PCMTD1Q96MG8 357 aaPredicted RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 IGFLR1Q9H665 355 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 METTL14Q9HCE5 456 aaKnown RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 LUC7LQ9NQ29 371 aaKnown RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 STIM2Q9P246 746 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 ARMCX3Q9UH62 379 aaPredicted RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 SRRM3A6NNA2 597 aaPredicted RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 EBAG9O00559 213 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 TEX28O15482 410 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 NCK2O43639 380 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 CLASP2O75122 1294 aaKnown RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 MYBL2P10244 700 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 KIF11P52732 1056 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 PPP3CAQ08209 521 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 BIRC3Q13489 604 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 MRPL58Q14197 206 aaKnown RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 SV2AQ7L0J3 742 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 TADA2BQ86TJ2 420 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 EFHBQ8N7U6 833 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 EIF1ADQ8N9N8 165 aaKnown RBP21.76■■□□□ 1.07
SYNC-201ENST00000373484 CAPS2Q9BXY5 557 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 NDST4Q9H3R1 872 aa21.76■■□□□ 1.07
SYNC-201ENST00000373484 SPTBN5Q9NRC6 3674 aaKnown RBP21.75■■□□□ 1.07
SYNC-201ENST00000373484 ARHGEF37A1IGU5 675 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 MACROD2A1Z1Q3 448 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 EIF3HO15372 352 aaKnown RBP eCLIP21.75■■□□□ 1.07
SYNC-201ENST00000373484 ODC1P11926 461 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 TYMPP19971 482 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 C2orf54Q08AI8 447 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 MYO1EQ12965 1108 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 KCNC3Q14003 757 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 CTC1Q2NKJ3 1217 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 ICE2Q659A1 982 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 SUGP1Q8IWZ8 645 aaKnown RBP21.75■■□□□ 1.07
SYNC-201ENST00000373484 MREGQ8N565 214 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 HPDLQ96IR7 371 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 GDAP2Q9NXN4 497 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 ARHGAP20Q9P2F6 1191 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 MTRRQ9UBK8 725 aa21.75■■□□□ 1.07
SYNC-201ENST00000373484 CYB561D2O14569 222 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 ZNF185O15231 689 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 VNN1O95497 513 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 GNA14O95837 355 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 CYP11A1P05108 521 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 ADH1AP07327 375 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 RPL17P18621 184 aaKnown RBP21.74■■□□□ 1.07
SYNC-201ENST00000373484 GTF2H1P32780 548 aa21.74■■□□□ 1.07
SYNC-201ENST00000373484 MARSP56192 900 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms