RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 UBA3Q8TBC4 463 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 PPM1EQ8WY54 764 aa19.73■□□□□ 0.75
USP49-202ENST00000373010 HEXIM2Q96MH2 286 aaKnown RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 ZNF317Q96PQ6 595 aaPredicted RBP19.73■□□□□ 0.75
USP49-202ENST00000373010 RBM15Q96T37 977 aaKnown RBP eCLIP19.73■□□□□ 0.75
USP49-202ENST00000373010 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.73■□□□□ 0.75
USP49-202ENST00000373010 CITO14578 2027 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 IFNAR2P48551 515 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 CNGA2Q16280 664 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 CYP4F22Q6NT55 531 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 POLNQ7Z5Q5 900 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 PCSK1NQ9UHG2 260 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 DRG1Q9Y295 367 aaKnown RBP19.72■□□□□ 0.75
USP49-202ENST00000373010 TRIP11Q15643 1979 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 KAT6AQ92794 2004 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 PIK3R2O00459 728 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 ATICP31939 592 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 MAGEA4P43358 317 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 MARCH8Q5T0T0 291 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 CYP4X1Q8N118 509 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 CXCL16Q9H2A7 254 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 CYP3A43Q9HB55 503 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 SAYSD1Q9NPB0 183 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 DPP3Q9NY33 737 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 GGA2Q9UJY4 613 aa19.72■□□□□ 0.75
USP49-202ENST00000373010 IFNB1P01574 187 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 CD48P09326 243 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 GPD2P43304 727 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 SF3A3Q12874 501 aaKnown RBP eCLIP19.71■□□□□ 0.75
USP49-202ENST00000373010 ZNF268Q14587 947 aaPredicted RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 TAF5Q15542 800 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 GRIK4Q16099 956 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 HP1BP3Q5SSJ5 553 aaPredicted RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 PPP1R13LQ8WUF5 828 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 NKD2Q969F2 451 aaPredicted RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 EMID1Q96A84 441 aaPredicted RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 MS4A4AQ96JQ5 239 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 ACAP3Q96P50 834 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 VRTNQ9H8Y1 702 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 TBK1Q9UHD2 729 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 COL1A2P08123 1366 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 SGK1O00141 431 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 PECAM1P16284 738 aaPredicted RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 SMPD1P17405 629 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 CYP3A5P20815 502 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 NDST1P52848 882 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 CACNA2D3Q8IZS8 1091 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 CCHCR1Q8TD31 782 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 MGARPQ8TDB4 240 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 FNIP1Q8TF40 1166 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 GTF3C2Q8WUA4 911 aaPredicted RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 WDR35Q9P2L0 1181 aa19.71■□□□□ 0.75
USP49-202ENST00000373010 TPX2Q9ULW0 747 aaKnown RBP19.71■□□□□ 0.75
USP49-202ENST00000373010 CCL15-CCL14A0A0B4J2E2 113 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 CST8O60676 142 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 KRT7P08729 469 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 KDELR1P24390 212 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 LRRC14Q15048 493 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 CCL15Q16663 113 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 HADHQ16836 314 aaKnown RBP19.7■□□□□ 0.74
USP49-202ENST00000373010 VSTM1Q6UX27 236 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 RELL1Q8IUW5 271 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 LRRC34Q8IZ02 419 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 SLC35B2Q8TB61 432 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 ACTL9Q8TC94 416 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 MCRS1Q96EZ8 462 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 FAXDC2Q96IV6 333 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 ITGAVP06756 1048 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 VDRP11473 427 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 P4HA1P13674 534 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 OTUD4Q01804 1114 aaKnown RBP19.7■□□□□ 0.74
USP49-202ENST00000373010 TMEM62Q0P6H9 643 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 FASTKD3Q14CZ7 662 aaKnown RBP19.7■□□□□ 0.74
USP49-202ENST00000373010 GKAP1Q5VSY0 366 aaPredicted RBP19.7■□□□□ 0.74
USP49-202ENST00000373010 YTHDF3Q7Z739 585 aaKnown RBP19.7■□□□□ 0.74
USP49-202ENST00000373010 DPP9Q86TI2 863 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 BRI3BPQ8WY22 251 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 KIF12Q96FN5 646 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 CABS1Q96KC9 395 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 GINS2Q9Y248 185 aa19.7■□□□□ 0.74
USP49-202ENST00000373010 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.7■□□□□ 0.74
USP49-202ENST00000373010 A0A1B0GUA9 196 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 TMEM120BA0PK00 339 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 TCEA3O75764 348 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 MIPP30301 263 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 GSCP56915 257 aaPredicted RBP19.69■□□□□ 0.74
USP49-202ENST00000373010 RBP5P82980 135 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 KIZQ2M2Z5 673 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 FAM102AQ5T9C2 384 aaPredicted RBP19.69■□□□□ 0.74
USP49-202ENST00000373010 ITGA11Q9UKX5 1188 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 BARX2Q9UMQ3 279 aaPredicted RBP19.69■□□□□ 0.74
USP49-202ENST00000373010 NAALADL1Q9UQQ1 740 aa19.69■□□□□ 0.74
USP49-202ENST00000373010 HMGCRP04035 888 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 GABRB2P47870 512 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 RAB6CQ53S08 254 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 SH3PXD2AQ5TCZ1 1133 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 SMYD5Q6GMV2 418 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 PACS2Q86VP3 889 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 HSPH1Q92598 858 aa19.68■□□□□ 0.74
USP49-202ENST00000373010 ADPGKQ9BRR6 497 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms