RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 CEP104O60308 925 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 CST3P01034 146 aaPredicted RBP17.02■□□□□ 0.32
C9orf78-201ENST00000372447 ITGB1P05556 798 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 AP3M2P53677 418 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 ERVK-21P61565 698 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 C8orf74Q6P047 294 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 CD300LGQ6UXG3 332 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 HDAC7Q8WUI4 952 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 BCL7CQ8WUZ0 217 aaPredicted RBP17.02■□□□□ 0.32
C9orf78-201ENST00000372447 MARCH5Q9NX47 278 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 DMGDHQ9UI17 866 aaKnown RBP17.02■□□□□ 0.32
C9orf78-201ENST00000372447 ITGA11Q9UKX5 1188 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.02■□□□□ 0.32
C9orf78-201ENST00000372447 SZT2Q5T011 3432 aa17.02■□□□□ 0.32
C9orf78-201ENST00000372447 B3GAT3O94766 335 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 KRT19P08727 400 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 POLR2BP30876 1174 aaKnown RBP17.02■□□□□ 0.31
C9orf78-201ENST00000372447 CTNNB1P35222 781 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 RNASE9P60153 205 aaKnown RBP17.02■□□□□ 0.31
C9orf78-201ENST00000372447 DCLRE1AQ6PJP8 1040 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 SLC39A11Q8N1S5 342 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 KLHL23Q8NBE8 558 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 HASPINQ8TF76 798 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 IGSF21Q96ID5 467 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 COLEC11Q9BWP8 271 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 TMEM59LQ9UK28 342 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 AGAP1Q9UPQ3 857 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 RWDD3Q9Y3V2 267 aa17.02■□□□□ 0.31
C9orf78-201ENST00000372447 C5orf67F2Z3F1 127 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 CASP8Q14790 479 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 RASGEF1CQ8N431 466 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 PLVAPQ9BX97 442 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 UBXN6Q9BZV1 441 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 SPG21Q9NZD8 308 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 STIM2Q9P246 746 aa17.01■□□□□ 0.31
C9orf78-201ENST00000372447 PGRMC1O00264 195 aaKnown RBP17■□□□□ 0.31
C9orf78-201ENST00000372447 PHACTR2O75167 634 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 FGF18O76093 207 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 BPIFB4P59827 614 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 RBP5P82980 135 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 SLC7A5Q01650 507 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 CUL2Q13617 745 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
C9orf78-201ENST00000372447 C11orf63Q6NUN7 778 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 SAMD11Q96NU1 681 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 APOBEC3GQ9HC16 384 aaKnown RBP17■□□□□ 0.31
C9orf78-201ENST00000372447 ADAM28Q9UKQ2 775 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 CARNS1A5YM72 827 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 TMEM189-UBE2V1I3L0A0 370 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 SPTLC1O15269 473 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 DDX3YO15523 660 aaKnown RBP17■□□□□ 0.31
C9orf78-201ENST00000372447 TADA2AO75478 443 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 MTA2O94776 668 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 MYBL2P10244 700 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 PPM1AP35813 382 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 LILRA4P59901 499 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 TNNC1P63316 161 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 MRPS25P82663 173 aaKnown RBP17■□□□□ 0.31
C9orf78-201ENST00000372447 NCOA4Q13772 614 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
C9orf78-201ENST00000372447 ACAD10Q6JQN1 1059 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 ZNF677Q86XU0 584 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 ARNTL2Q8WYA1 636 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 KRT12Q99456 494 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 ZNF576Q9H609 170 aa17■□□□□ 0.31
C9orf78-201ENST00000372447 KIAA1671Q9BY89 1806 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 CYP1A2P05177 515 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 RB1P06400 928 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 ACO1P21399 889 aaKnown RBP16.99■□□□□ 0.31
C9orf78-201ENST00000372447 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
C9orf78-201ENST00000372447 BRCC3P46736 316 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 NOP14P78316 857 aaKnown RBP16.99■□□□□ 0.31
C9orf78-201ENST00000372447 PLCB3Q01970 1234 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 CLEC16AQ2KHT3 1053 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 TMEM169Q96HH4 297 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 VN1R3Q9BXE9 311 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 GPR62Q9BZJ7 368 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
C9orf78-201ENST00000372447 GTF3C4Q9UKN8 822 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 ALG6Q9Y672 507 aa16.99■□□□□ 0.31
C9orf78-201ENST00000372447 EPOPA6NHQ4 379 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 EFEMP2O95967 443 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 TNFRSF8P28908 595 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 MYL6P60660 151 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 TRPC3Q13507 836 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 TIGD5Q53EQ6 642 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
C9orf78-201ENST00000372447 LRRC52Q8N7C0 313 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 FBXO22Q8NEZ5 403 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 ZNF653Q96CK0 615 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 HPDLQ96IR7 371 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 TTYH1Q9H313 450 aaPredicted RBP16.98■□□□□ 0.31
C9orf78-201ENST00000372447 ST7Q9NRC1 585 aa16.98■□□□□ 0.31
C9orf78-201ENST00000372447 TTC7AQ9ULT0 858 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms