RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 KAT2BQ92831 832 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 OTUB1Q96FW1 271 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 RNF103-CHMP3A0A140T963 221 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 NDUFS3O75489 264 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 LMNAP02545 664 aaKnown RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 RALGDSQ12967 914 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 CDC16Q13042 620 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 NR1I3Q14994 352 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 BTBD6Q96KE9 485 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 C17orf80Q9BSJ5 609 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ASCC2Q9H1I8 757 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ZFP69BQ9UJL9 534 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 SLC30A1Q9Y6M5 507 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ADCY3O60266 1144 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 EGFRP00533 1210 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 PDK1Q15118 436 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ANKS6Q68DC2 871 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 PTRHD1Q6GMV3 140 aaKnown RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 FBXO38Q6PIJ6 1188 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 IPMKQ8NFU5 416 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 GPR63Q9BZJ6 419 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 LAMTOR4Q0VGL1 99 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 LAMB3Q13751 1172 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 MFSD10Q14728 455 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 CCDC142Q17RM4 750 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 C1orf146Q5VVC0 180 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 PTPRN2Q92932 1015 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 FBXO32Q969P5 355 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 OSMRQ99650 979 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 SCOCQ9UIL1 159 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ANGPTL2Q9UKU9 493 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 A0A087WZ62 844 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 CYTH3O43739 400 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 PDHA1P08559 390 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 MUTP22033 750 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 MAP2K2P36507 400 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 SLC11A2P49281 568 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 GYS2P54840 703 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ACOT1Q86TX2 421 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 FEZF2Q8TBJ5 459 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 SOCS4Q8WXH5 440 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 P2RX7Q99572 595 aaKnown RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 FDXACB1Q9BRP7 624 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 EIF2AQ9BY44 585 aaKnown RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 GGT7Q9UJ14 662 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 SNX5Q9Y5X3 404 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 KIF1AQ12756 1690 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 TBKBP1A7MCY6 615 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 PPP1R3GB7ZBB8 358 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 H0YC42 278 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 MYL4P12829 197 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 BEND6Q5SZJ8 279 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 MTHFD1LQ6UB35 978 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 DNAJB3Q8WWF6 145 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 SHCBP1LQ9BZQ2 653 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 BRD8Q9H0E9 1235 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 WDCPQ9H6R7 721 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 TMEM39AQ9NV64 488 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 NDOR1Q9UHB4 597 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 CASTOR2A6NHX0 329 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 M0QYT0 321 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 LZTS3O60299 673 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 CYP7B1O75881 506 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 THP07101 528 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ALDH5A1P51649 535 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 CUL3Q13618 768 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ACSF2Q96CM8 615 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 TGS1Q96RS0 853 aaKnown RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 TSEN34Q9BSV6 310 aaKnown RBP10.2□□□□□ -0.78
COL4A6-202ENST00000372216 TRIM17Q9Y577 477 aa10.2□□□□□ -0.78
COL4A6-202ENST00000372216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-202ENST00000372216 A0A1W2PQJ5 194 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 BRAFP15056 766 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 TCN1P20061 433 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-202ENST00000372216 SLC26A2P50443 739 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 SOX10P56693 466 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 ZNF177Q13360 481 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-202ENST00000372216 TMA16Q96EY4 203 aaKnown RBP10.19□□□□□ -0.78
COL4A6-202ENST00000372216 PPP1R2P1Q96PQ5 205 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 LRRC37BQ96QE4 947 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 TRIM51Q9BSJ1 452 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 PCDHB12Q9Y5F1 795 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 MRFAP1Q9Y605 127 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 SSU72P8A0A1W2PR75 194 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 PCDH8O95206 1070 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 RPLP2P05387 115 aaKnown RBP10.19□□□□□ -0.78
COL4A6-202ENST00000372216 ERVK-10P10266 1014 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 COMTP21964 271 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 FKBP1AP62942 108 aaKnown RBP10.19□□□□□ -0.78
COL4A6-202ENST00000372216 HPCAP84074 193 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 LLGL2Q6P1M3 1020 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 CBWD2Q8IUF1 395 aa10.19□□□□□ -0.78
COL4A6-202ENST00000372216 XPNPEP3Q9NQH7 507 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms