RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 FAM193BQ96PV7 902 aaPredicted RBP27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 TRIM7Q9C029 511 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 CARD9Q9H257 536 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 TBC1D13Q9NVG8 400 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 IP6K2Q9UHH9 426 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 CCDC66A2RUB6 948 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 TMEM191CA6NGB0 347 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 PPP1R15BQ5SWA1 713 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 TEX35Q5T0J7 233 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 TTC30AQ86WT1 665 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 METTL23Q86XA0 190 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 TSC1Q92574 1164 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 CD101Q93033 1021 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 PAWRQ96IZ0 340 aaKnown RBP27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 ST7Q9NRC1 585 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 PTPN1P18031 435 aaKnown RBP27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 BCAT1P54687 386 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 NAA30Q147X3 362 aaPredicted RBP27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 XYLT1Q86Y38 959 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 RSPH1Q8WYR4 309 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 MS4A14Q96JA4 679 aa27.78■■■□□ 2.04
ATPAF1-202ENST00000371937 SIGLEC16A6NMB1 481 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 M0QZQ0 153 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 CEP104O60308 925 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 ERBB2P04626 1255 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 CYP11A1P05108 521 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 CLTBP09497 229 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 HSPA1AP0DMV8 641 aaKnown RBP27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 HSPA1BP0DMV9 641 aaKnown RBP27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 CTNNA2P26232 953 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 MAN1A1P33908 653 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 CTNNA1P35221 906 aaKnown RBP27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 BST2Q10589 180 aaKnown RBP27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 CD300LGQ6UXG3 332 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 ZNF280BQ86YH2 543 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 ACTRT1Q8TDG2 376 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 SLC35F5Q8WV83 523 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 MCEEQ96PE7 176 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 TMEM106CQ9BVX2 250 aa27.77■■■□□ 2.04
ATPAF1-202ENST00000371937 DDHD2O94830 711 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 KRT3P12035 628 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 CCDC130P13994 396 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 PCSK1P29120 753 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 RPL7AP62424 266 aaKnown RBP27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 PAN2Q504Q3 1202 aaKnown RBP27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 COLGALT2Q8IYK4 626 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 SLC2A14Q8TDB8 520 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 SUSD3Q96L08 255 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 HNRNPABQ99729 332 aaKnown RBP27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 LPIN3Q9BQK8 851 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 PCDHA3Q9Y5H8 950 aa27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 TIMM13Q9Y5L4 95 aaPredicted RBP27.76■■■□□ 2.04
ATPAF1-202ENST00000371937 ADORA2BP29275 332 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 RFC2P35250 354 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 ELF2Q15723 593 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 DEFB128Q7Z7B8 93 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 SPATA4Q8NEY3 305 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 MCRS1Q96EZ8 462 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 SLC4A5Q9BY07 1137 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 TJP2Q9UDY2 1190 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 CDH9Q9ULB4 789 aa27.76■■■□□ 2.03
ATPAF1-202ENST00000371937 GOLGA8SH3BPF8 625 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 TMEM189-UBE2V1I3L0A0 370 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 ACAT1P24752 427 aaKnown RBP27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 BRCC3P46736 316 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 SLC8A3P57103 927 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 PDE4CQ08493 712 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 CLUL1Q15846 466 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 TCTN1Q2MV58 587 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 NECAB2Q7Z6G3 386 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 RASGEF1CQ8N431 466 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 TET1Q8NFU7 2136 aa27.75■■■□□ 2.03
ATPAF1-202ENST00000371937 SCN5AQ14524 2016 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 GJB6O95452 261 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 PEX5P50542 639 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 PMF1Q6P1K2 205 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 TMEM110Q86TL2 294 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 GPR161Q8N6U8 529 aaKnown RBP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 HASPINQ8TF76 798 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 ALG3Q92685 438 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 SYT15Q9BQS2 421 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 CYLDQ9NQC7 956 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 EHD2Q9NZN4 543 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 TTC7AQ9ULT0 858 aaPredicted RBP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 PGRMC1O00264 195 aaKnown RBP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 ATP2C2O75185 946 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 PIGHQ14442 188 aaPredicted RBP27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 NPAS4Q8IUM7 802 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 CRIPAKQ8N1N5 446 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 KRT35Q92764 455 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 CASD1Q96PB1 797 aa27.74■■■□□ 2.03
ATPAF1-202ENST00000371937 TTC3P53804 2025 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 E5RJQ4 531 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 I3L4J1 428 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 TYMPP19971 482 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 OR1G1P47890 313 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 RWDD2BP57060 319 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms