RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 KLF11O14901 512 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 PIM1P11309 404 aaPredicted RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 HIF1AQ16665 826 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 TSSK1BQ9BXA7 367 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 MRPL47Q9HD33 250 aaKnown RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 STRIP2Q9ULQ0 834 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 PPME1Q9Y570 386 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 BUD23O43709 281 aaKnown RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 MAGEC1O60732 1142 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 TROVE2P10155 538 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHUK-201ENST00000370397 ARL4CP56559 192 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 MYLK4Q86YV6 388 aaPredicted RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 GPD1LQ8N335 351 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 RBM41Q96IZ5 413 aaKnown RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 KLF6Q99612 283 aaPredicted RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 MTO1Q9Y2Z2 717 aaKnown RBP18.42■□□□□ 0.54
CHUK-201ENST00000370397 ZNF541Q9H0D2 1346 aa18.42■□□□□ 0.54
CHUK-201ENST00000370397 A8MXQ7 604 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 F8W8V4 182 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 GOLGA8SH3BPF8 625 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 GOLGA8MH3BSY2 632 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 GOLGA8RI6L899 631 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 GYG2O15488 501 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 GSTA3Q16772 222 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 ARFGAP1Q8N6T3 406 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 OXNAD1Q96HP4 312 aaPredicted RBP18.41■□□□□ 0.54
CHUK-201ENST00000370397 PANX3Q96QZ0 392 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 TUBB6Q9BUF5 446 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 TRIM55Q9BYV6 548 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 PLAC1Q9HBJ0 212 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 USTQ9Y2C2 406 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.41■□□□□ 0.54
CHUK-201ENST00000370397 KCNA3P22001 575 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 CDHR3Q6ZTQ4 885 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 ALYREFQ86V81 257 aaKnown RBP18.41■□□□□ 0.54
CHUK-201ENST00000370397 SHKBP1Q8TBC3 707 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 DTX3LQ8TDB6 740 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 DBNDD1Q9H9R9 158 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 ALG13Q9NP73 1137 aaKnown RBP18.41■□□□□ 0.54
CHUK-201ENST00000370397 FBXO28Q9NVF7 368 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 SKIP12755 728 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 PSMC5P62195 406 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 TFDP3Q5H9I0 405 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 LMBRD2Q68DH5 695 aaPredicted RBP18.41■□□□□ 0.54
CHUK-201ENST00000370397 TRIM72Q6ZMU5 477 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 ACSF2Q96CM8 615 aaPredicted RBP18.41■□□□□ 0.54
CHUK-201ENST00000370397 C10orf88Q9H8K7 445 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 C1orf112Q9NSG2 853 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 SCINQ9Y6U3 715 aa18.41■□□□□ 0.54
CHUK-201ENST00000370397 MAGEA13PA6NCF6 341 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 NFIBO00712 420 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 PTGER2P43116 358 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 ARFIP2P53365 341 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 TRAF1Q13077 416 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 RNF111Q6ZNA4 994 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 NIPA2Q8N8Q9 360 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 ALKBH8Q96BT7 664 aaKnown RBP18.4■□□□□ 0.54
CHUK-201ENST00000370397 PARVAQ9NVD7 372 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 SAE1Q9UBE0 346 aaPredicted RBP18.4■□□□□ 0.54
CHUK-201ENST00000370397 IP6K2Q9UHH9 426 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 SCOCQ9UIL1 159 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 SERPINA10Q9UK55 444 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 EXOC7Q9UPT5 735 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 HLA-DRAP01903 254 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 GARTP22102 1010 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 CRABP2P29373 138 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 GJC1P36383 396 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 C3orf62Q6ZUJ4 267 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 NR1H4Q96RI1 486 aaPredicted RBP18.4■□□□□ 0.54
CHUK-201ENST00000370397 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 ARMCX1Q9P291 453 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 FCHO1O14526 889 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 ENTPD3O75355 529 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 LYNP07948 512 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 CETN2P41208 172 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 CUL2Q13617 745 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 PSMD6Q15008 389 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 ZC3H18Q86VM9 953 aaKnown RBP18.4■□□□□ 0.54
CHUK-201ENST00000370397 FBXO36Q8NEA4 188 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 AGBL1Q96MI9 1066 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 VCXQ9H320 206 aa18.4■□□□□ 0.54
CHUK-201ENST00000370397 FAM237BA0A1B0GVD1 139 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 THOC5Q13769 683 aaKnown RBP18.39■□□□□ 0.53
CHUK-201ENST00000370397 TEX44Q53QW1 395 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 PODNQ7Z5L7 613 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 PPIL6Q8IXY8 311 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 ATP11CQ8NB49 1132 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 HAUS1Q96CS2 278 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 APOPT1Q96IL0 206 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 STYXL1Q9Y6J8 313 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 KRT1P04264 644 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 ATF7P17544 494 aaPredicted RBP18.39■□□□□ 0.53
CHUK-201ENST00000370397 BGNP21810 368 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 BPIFB4P59827 614 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 SLC25A11Q02978 314 aaKnown RBP18.39■□□□□ 0.53
CHUK-201ENST00000370397 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
CHUK-201ENST00000370397 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms