RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 MAP7Q14244 749 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 ZRSR2Q15696 482 aaKnown RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 SLC44A4Q53GD3 710 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 FAM182AQ5T1J6 154 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 RHOT1Q8IXI2 618 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 TTC1Q99614 292 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 MYPNQ86TC9 1320 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 GNA15P30679 374 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 MAN1A1P33908 653 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 PTGER2P43116 358 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 POLGP54098 1239 aaPredicted RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 WNT7BP56706 349 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 RPL7AP62424 266 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 DYNLT1P63172 113 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 IL9RQ01113 521 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 GPS1Q13098 491 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 HSPBAP1Q96EW2 488 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 C10orf88Q9H8K7 445 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 DCTN4Q9UJW0 460 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 DNPEPQ9ULA0 475 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 LSM1O15116 133 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 RNASEH1O60930 286 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 PROSCO94903 275 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 POTEJP0CG39 1038 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 CCR3P51677 355 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 HPCAP84074 193 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 SLC34A1Q06495 639 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 STRN3Q13033 797 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 THOC5Q13769 683 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 BAATQ14032 418 aaPredicted RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 WASHC2DQ5SRD0 308 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 ANKMY2Q8IV38 441 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 ANKRD35Q8N283 1001 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 TMEM143Q96AN5 459 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 ZNF184Q99676 751 aaPredicted RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 ASCC2Q9H1I8 757 aaPredicted RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 NEU2Q9Y3R4 380 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 ZNF862O60290 1169 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 BANF1O75531 89 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 FDX1P10109 184 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 VARSP26640 1264 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 CPA2P48052 419 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 ARSEP51690 589 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 NLRP11P59045 1033 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 BTG3Q14201 252 aaPredicted RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 FBXO41Q8TF61 875 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 MFSD14AQ96MC6 490 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 SMC6Q96SB8 1091 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 TUT1Q9H6E5 874 aaKnown RBP16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 COMMD3-BMI1R4GMX3 469 aa16.75■□□□□ 0.27
SYNCRIP-202ENST00000369622 LRRIQ4A6NIV6 560 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 CA4P22748 312 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 MLH1P40692 756 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 CETN2P41208 172 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 SLC1A1P43005 524 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 NOP14P78316 857 aaKnown RBP16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 KCTD21Q4G0X4 260 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 SH3D19Q5HYK7 790 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 RNF43Q68DV7 783 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 TRIM67Q6ZTA4 783 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 ZBED8Q8IZ13 594 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 TMC2Q8TDI7 906 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 CADM1Q9BY67 442 aaKnown RBP16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 MAPK13O15264 365 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 TAC1P20366 129 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 GRIA2P42262 883 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 JAK3P52333 1124 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 PDCD7Q8N8D1 485 aaKnown RBP16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 SAE1Q9UBE0 346 aaPredicted RBP16.74■□□□□ 0.27
SYNCRIP-202ENST00000369622 CFAP69A5D8W1 941 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 FAM47DPA6NHR8 397 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 PSMG1O95456 288 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 KRT1P04264 644 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 GCNT1Q02742 428 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 CAV1Q03135 178 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 BTKQ06187 659 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 MAMLD1Q13495 774 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 MTFR1Q15390 333 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 PKN2Q16513 984 aaKnown RBP16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 DCUN1D2Q6PH85 259 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 MARK2Q7KZI7 788 aaKnown RBP16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 NANOGNBQ7Z5D8 188 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 MTDHQ86UE4 582 aaKnown RBP16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 FAM81BQ96LP2 452 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 ST6GALNAC4Q9H4F1 302 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 NUMBLQ9Y6R0 609 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 AMPD1P23109 780 aa16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 SKIV2L2P42285 1042 aaKnown RBP16.73■□□□□ 0.27
SYNCRIP-202ENST00000369622 WDR4P57081 412 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms