RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ODC1P11926 461 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PAMP19021 973 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 HNRNPH1P31943 449 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 HSPA9P38646 679 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 RAB27AP51159 221 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 JAM2P57087 298 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 TPI1P60174 286 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 GUCY1A3Q02108 690 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 MAP3K10Q02779 954 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 THOC5Q13769 683 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 ZKSCAN8Q15776 578 aaPredicted RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 SPDYCQ5MJ68 293 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 TDRD10Q5VZ19 366 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PPIL6Q8IXY8 311 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 ALKBH8Q96BT7 664 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 GRAMD1AQ96CP6 724 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 DDX27Q96GQ7 796 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PPP1R2P1Q96PQ5 205 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 TBCBQ99426 244 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PITPNM3Q9BZ71 974 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 RRAGCQ9HB90 399 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 GDF3Q9NR23 364 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 BTBD7Q9P203 1132 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 DSEQ9UL01 958 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 STK38LQ9Y2H1 464 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 C2CD2Q9Y426 696 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 LAMB2P55268 1798 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PSMD3O43242 534 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 FBXO21O94952 628 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 ASS1P00966 412 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 ZBTB48P10074 688 aaPredicted RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 MAGEA4P43358 317 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 LHX1P48742 406 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 FMO1Q01740 532 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 DEUP1Q05D60 604 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 AP1B1Q10567 949 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 MAP2K5Q13163 448 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PDK1Q15118 436 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 DUSP28Q4G0W2 176 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 LRRC38Q5VT99 294 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 JADE1Q6IE81 842 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 SPOCD1Q6ZMY3 1216 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 ACOT1Q86TX2 421 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 NLRP14Q86W24 1093 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 PHF13Q86YI8 300 aaPredicted RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 AENQ8WTP8 325 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 KRT35Q92764 455 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 COPS5Q92905 334 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 HES6Q96HZ4 224 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 SCYL1Q96KG9 808 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 SERPINB12Q96P63 405 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 TRPV6Q9H1D0 765 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 CDT1Q9H211 546 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 YY1AP1Q9H869 796 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 UBN1Q9NPG3 1134 aa5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 GEMIN8Q9NWZ8 242 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 CPSF2Q9P2I0 782 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.57□□□□□ -1.52
SMNDC1-202ENST00000369603 GOLGA8QA0A0J9YX86 632 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 GOLGA8OA6NCC3 632 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 GOLGA8NF8WBI6 632 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PDE2AO00408 941 aaPredicted RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 F9P00740 461 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 THP07101 528 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 ADCY1Q08828 1119 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 BST2Q10589 180 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 GLRA4Q5JXX5 417 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 RAPH1Q70E73 1250 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 MOB2Q70IA6 237 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 UNC93AQ86WB7 457 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 KATNAL2Q8IYT4 538 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 ADGRF2Q8IZF7 708 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 SGSM3Q96HU1 749 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 SHANK3Q9BYB0 1731 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 EPN3Q9H201 632 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM124BQ9H5Z6 455 aaPredicted RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 GPBP1L1Q9HC44 474 aaPredicted RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 RAB6BQ9NRW1 208 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 TXLNGQ9NUQ3 528 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 BCAP29Q9UHQ4 241 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 ZC3H4Q9UPT8 1303 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 BCORQ6W2J9 1755 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 C4AP0C0L4 1744 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 SOWAHBA6NEL2 793 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PIK3R2O00459 728 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF263O14978 683 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 B4GALT4O60513 344 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 GRAP2O75791 330 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 THPOP40225 353 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 NDST1P52848 882 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC29A2Q14542 456 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 MORF4L2Q15014 288 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 FSCN1Q16658 493 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 SMTNL2Q2TAL5 461 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 HSDL1Q3SXM5 330 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 MTHFD1LQ6UB35 978 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 ZC3H3Q8IXZ2 948 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 DAW1Q8N136 415 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms