RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 UBR7Q8N806 425 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 CXorf38Q8TB03 319 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 URGCPQ8TCY9 931 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 SLC22A17Q8WUG5 538 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 FAM193BQ96PV7 902 aaPredicted RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 UCN2Q96RP3 112 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 ADAM7Q9H2U9 754 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 RPF1Q9H9Y2 349 aaKnown RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 RSAD1Q9HA92 442 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 PDE11AQ9HCR9 933 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 CACNG4Q9UBN1 327 aa9.39□□□□□ -0.91
SNX27-201ENST00000368838 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
SNX27-201ENST00000368838 PDCD11Q14690 1871 aaKnown RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 A0A0A6YYK5 440 aaPredicted RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 NRP1O14786 923 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 INPPL1O15357 1258 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 B4GALT5O43286 388 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 KRT86O43790 486 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 CNPP09543 421 aaKnown RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 SPATA31D3P0C874 917 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 TNNI1P19237 187 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 AVPR2P30518 371 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 ARHGAP25P42331 645 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 HADHBP55084 474 aaKnown RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 PTK2Q05397 1052 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 SPA17Q15506 151 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 NAB2Q15742 525 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 ASIC2Q16515 512 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 SLC10A6Q3KNW5 377 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 WDR44Q5JSH3 913 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 SPATA31D4Q6ZUB0 917 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 TOGARAM2Q6ZUX3 1019 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 TAS1R1Q7RTX1 841 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 TRAPPC11Q7Z392 1133 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 ST13P5Q8NFI4 369 aaPredicted RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 SEMA4DQ92854 862 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 CCDC127Q96BQ5 260 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 PGBD4Q96DM1 585 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 ACAP3Q96P50 834 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 KLHL5Q96PQ7 755 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 GAD1Q99259 594 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 CCDC94Q9BW85 323 aaPredicted RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 ALG2Q9H553 416 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 NLRC4Q9NPP4 1024 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 TOPORSQ9NS56 1045 aaPredicted RBP9.38□□□□□ -0.91
SNX27-201ENST00000368838 MIOSQ9NXC5 875 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 CNTN3Q9P232 1028 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 ANKFY1Q9P2R3 1169 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 NR2E1Q9Y466 385 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 IPPQ9Y573 584 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 SPTBN4Q9H254 2564 aa9.38□□□□□ -0.91
SNX27-201ENST00000368838 USP27XA6NNY8 438 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 H0Y858 1186 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 FOXN3O00409 490 aaPredicted RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 ZNF263O14978 683 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 AKR1B10O60218 316 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 VNN1O95497 513 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 HLA-DRAP01903 254 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 DLATP10515 647 aaKnown RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 SKIP12755 728 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 ITGA4P13612 1032 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 KLRC2P26717 231 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 MLH1P40692 756 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 MTHFRP42898 656 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 OR1G1P47890 313 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 SCNN1GP51170 649 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 ITIH3Q06033 890 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 GOLGA8FQ08AF8 430 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 GOLGA8DPQ0D2H9 430 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 NCOA4Q13772 614 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 RAPGEF1Q13905 1077 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 MTF1Q14872 753 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 ATAT1Q5SQI0 421 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 SWT1Q5T5J6 900 aaKnown RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 MRPL10Q7Z7H8 261 aaKnown RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 TDRD5Q8NAT2 981 aaKnown RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 OLIG1Q8TAK6 271 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 TSC1Q92574 1164 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 ANKRD36BP1Q96IX9 119 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 RIPOR3Q96MK2 946 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 KREMEN1Q96MU8 473 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 BCO2Q9BYV7 579 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 IMPG2Q9BZV3 1241 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 XYLT2Q9H1B5 865 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 KCNH6Q9H252 994 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 L2HGDHQ9H9P8 463 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms