RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SYNPO2Q9UMS6 1093 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 SCINQ9Y6U3 715 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 IPO5O00410 1097 aaKnown RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 ATP5BP06576 529 aaKnown RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 ITGAVP06756 1048 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 KRT5P13647 590 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 CDK7P50613 346 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 CDK18Q07002 472 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 OVGP1Q12889 678 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 HIF1AQ16665 826 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 CNPY1Q3B7I2 92 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 C6orf163Q5TEZ5 329 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 LRRC38Q5VT99 294 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 ADGRG6Q86SQ4 1221 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 MYLK4Q86YV6 388 aaPredicted RBP18.28■□□□□ 0.52
CHTOP-203ENST00000368690 GLIS1Q8NBF1 620 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 PPP2R3CQ969Q6 453 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 MFSD14AQ96MC6 490 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 ECSITQ9BQ95 431 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 CLUHO75153 1309 aa18.28■□□□□ 0.52
CHTOP-203ENST00000368690 ANPEPP15144 967 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 VCPP55072 806 aaKnown RBP18.27■□□□□ 0.52
CHTOP-203ENST00000368690 NCKAP1LP55160 1127 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 HNRNPDQ14103 355 aaKnown RBP18.27■□□□□ 0.52
CHTOP-203ENST00000368690 OASLQ15646 514 aaKnown RBP18.27■□□□□ 0.52
CHTOP-203ENST00000368690 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 PLEKHA7Q6IQ23 1121 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 CBWD2Q8IUF1 395 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 TAS1R2Q8TE23 839 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 ARHGEF4Q9NR80 690 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
CHTOP-203ENST00000368690 FARP1Q9Y4F1 1045 aaPredicted RBP18.27■□□□□ 0.52
CHTOP-203ENST00000368690 FCHO1O14526 889 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 CD58P19256 250 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 ETV4P43268 484 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 AP2B1P63010 937 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 IKQ13123 557 aaPredicted RBP18.27■□□□□ 0.51
CHTOP-203ENST00000368690 MAMLD1Q13495 774 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 LIN52Q52LA3 116 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 RASIP1Q5U651 963 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 DCAKDQ8WVC6 231 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 CPA5Q8WXQ8 436 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 OPTNQ96CV9 577 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 FBXL18Q96ME1 805 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 SLITRK1Q96PX8 696 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 PAFAH2Q99487 392 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 MIS12Q9H081 205 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 ZDHHC7Q9NXF8 308 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 ZBTB21Q9ULJ3 1066 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 WASF2Q9Y6W5 498 aa18.27■□□□□ 0.51
CHTOP-203ENST00000368690 CAPN14A8MX76 684 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 E7ESA3 106 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 CIB2O75838 187 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 P4HBP07237 508 aaKnown RBP18.26■□□□□ 0.51
CHTOP-203ENST00000368690 POLR2MP0CAP2 368 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 ZSCAN5DPP0CG00 497 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 NEK3P51956 506 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 ACTR3P61158 418 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 TBCCQ15814 346 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 DNAL1Q4LDG9 190 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 LRRC6Q86X45 466 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 PHF13Q86YI8 300 aaPredicted RBP18.26■□□□□ 0.51
CHTOP-203ENST00000368690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHTOP-203ENST00000368690 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 ZWILCHQ9H900 591 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 FBXO6Q9NRD1 293 aaPredicted RBP18.26■□□□□ 0.51
CHTOP-203ENST00000368690 KCNK4Q9NYG8 393 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 SLC17A7Q9P2U7 560 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 SNCAIPQ9Y6H5 919 aa18.26■□□□□ 0.51
CHTOP-203ENST00000368690 DENND3A2RUS2 1198 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 WDR91A4D1P6 747 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 CREB3O43889 395 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 TBC1D12O60347 775 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 TM7SF2O76062 418 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 LYPLA2O95372 231 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 GLRA2P23416 452 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 ECE1P42892 770 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 ARL4CP56559 192 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 TMCO4Q5TGY1 634 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 PYROXD1Q8WU10 500 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 FNBP1Q96RU3 617 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 NDNQ99608 321 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 C17orf75Q9HAS0 396 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.25■□□□□ 0.516e-8■■■■■ 32.4
CHTOP-203ENST00000368690 IRAK4Q9NWZ3 460 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 NDE1Q9NXR1 346 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 IP6K2Q9UHH9 426 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 PGAP2Q9UHJ9 254 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 GOLGA8IPA6NC78 632 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 GOLGA8JA6NMD2 632 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 FKBP6O75344 327 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 FAM155BO75949 473 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 AMPD1P23109 780 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 RARRES1P49788 294 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 SLC18A2Q05940 514 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 LSAMPQ13449 338 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
CHTOP-203ENST00000368690 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms