RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CORO1BQ9BR76 489 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 ADGRE3Q9BY15 652 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
SSR2-202ENST00000368311 NKIRAS1Q9NYS0 192 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 CASTOR2A6NHX0 329 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 SOBPA7XYQ1 873 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 SFI1A8K8P3 1242 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 PRR5-ARHGAP8B1AHC4 643 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 TADA3O75528 432 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 PSMD10O75832 226 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 GPD1P21695 349 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 MAP4P27816 1152 aaKnown RBP8.69□□□□□ -1.02
SSR2-202ENST00000368311 MAPK9P45984 424 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 HEATR6Q6AI08 1181 aaKnown RBP8.69□□□□□ -1.02
SSR2-202ENST00000368311 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 SH3KBP1Q96B97 665 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 AFF4Q9UHB7 1163 aaKnown RBP8.69□□□□□ -1.02
SSR2-202ENST00000368311 STARD13Q9Y3M8 1113 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 ZNF831Q5JPB2 1677 aa8.69□□□□□ -1.02
SSR2-202ENST00000368311 TBC1D3BA6NDS4 549 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 FGF10O15520 208 aaPredicted RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 MOCS2O96007 188 aaPredicted RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 TBX4P57082 545 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 TCP11X2Q5H9J9 407 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 CELF5Q8N6W0 485 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 B3GALNT2Q8NCR0 500 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 PPP4R1Q8TF05 950 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 BADQ92934 168 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 IER2Q9BTL4 223 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 PKP3Q9Y446 797 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 RECQL4O94761 1208 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 KIAA0754O94854 1291 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 F2P00734 622 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 APOA4P06727 396 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 SKILP12757 684 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 SMAD3P84022 425 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 PDK2Q15119 407 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 TTLL9Q3SXZ7 439 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 RARS2Q5T160 578 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 FUT10Q6P4F1 479 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 DENND5BQ6ZUT9 1274 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 GET4Q7L5D6 327 aaPredicted RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 RHOT1Q8IXI2 618 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 FAM129AQ9BZQ8 928 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 WNT8AQ9H1J5 351 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 ZNF214Q9UL59 606 aaPredicted RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 ZNF148Q9UQR1 794 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 SLC12A8A0AV02 714 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 SOWAHBA6NEL2 793 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 O00370 1275 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 LAMTOR5O43504 91 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 KRT3P12035 628 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 OXTRP30559 389 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 IFNA8P32881 189 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 HALP42357 657 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 HDAC4P56524 1084 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 CYP24A1Q07973 514 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 NME3Q13232 169 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 DMC1Q14565 340 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 GPAT2Q6NUI2 795 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 NUP93Q8N1F7 819 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 KREMEN2Q8NCW0 462 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 PLD4Q96BZ4 506 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 CPB2Q96IY4 423 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 SENP8Q96LD8 212 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 TEPSINQ96N21 525 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 WDR6Q9NNW5 1121 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 INTS13Q9NVM9 706 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 IGSF9Q9P2J2 1179 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 SNED1Q8TER0 1413 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 GTPBP10A4D1E9 387 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 PYGMP11217 842 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 GEMP55040 296 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 CDH8P55286 799 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 MRPS5P82675 430 aaKnown RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 ACAP1Q15027 740 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 FOXR2Q6PJQ5 311 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 ZNF655Q8N720 491 aaPredicted RBP8.68□□□□□ -1.02
SSR2-202ENST00000368311 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 TMEM176AQ96HP8 235 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 CALN1Q9BXU9 219 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 RETREG1Q9H6L5 497 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 WDCPQ9H6R7 721 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 KLK14Q9P0G3 267 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 ARFGEF2Q9Y6D5 1785 aa8.68□□□□□ -1.02
SSR2-202ENST00000368311 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 FMO5P49326 533 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ACOT2P49753 483 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SCNN1GP51170 649 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 DPYDQ12882 1025 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 PRKAA1Q13131 559 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 FBXO43Q4G163 708 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SLC39A12Q504Y0 691 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 USP39Q53GS9 565 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 LEKR1Q6ZMV7 388 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms