RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 MDM1Q8TC05 714 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 SDCCAG3Q96C92 435 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
PTPRK-203ENST00000368207 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 BEX3Q00994 111 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 ACVR2BQ13705 512 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
PTPRK-203ENST00000368207 SLC25A41Q8N5S1 370 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 ACTRT1Q8TDG2 376 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 SLITRK1Q96PX8 696 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 TMEM121Q9BTD3 319 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 ZNF518BQ9C0D4 1074 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
PTPRK-203ENST00000368207 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 LGALS2P05162 132 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 ETFBP38117 255 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 GCNT1Q02742 428 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 SH3BP5LQ7L8J4 393 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PPIL6Q8IXY8 311 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PORCNQ9H237 461 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 VGLL3A8MV65 326 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 POMCP01189 267 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 MCF2P10911 925 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 GLRA2P23416 452 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 LSP1P33241 339 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 BCAT1P54687 386 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PPHLN1Q8NEY8 458 aaKnown RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 ZNF669Q96BR6 464 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 SPDL1Q96EA4 605 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PPP1R36Q96LQ0 422 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 EGFL8Q99944 293 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 FOXP3Q9BZS1 431 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 SUN2Q9UH99 717 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 FAM47DPA6NHR8 397 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 EIF3HO15372 352 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■□□□□ 10.9
PTPRK-203ENST00000368207 GHRP10912 638 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 RAD51Q06609 339 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 SPATA21Q7Z572 469 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 HDAC7Q8WUI4 952 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 EPN3Q9H201 632 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 Q9H521 79 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 CYP3A43Q9HB55 503 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 AFF4Q9UHB7 1163 aaKnown RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 TSPAN16Q9UKR8 245 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
PTPRK-203ENST00000368207 ADRB2P07550 413 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 IRAK1P51617 712 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 UGCGQ16739 394 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PRAMEF19Q5SWL8 479 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 ACTL9Q8TC94 416 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 ULK4Q96C45 1275 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 CNPY3Q9BT09 278 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 USP18Q9UMW8 372 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 RIPK3Q9Y572 518 aa12.84□□□□□ -0.35
PTPRK-203ENST00000368207 PMPCBO75439 489 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ERFP50548 548 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 KCNMA1Q12791 1236 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 PPIL2Q13356 520 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 COBLL1Q53SF7 1204 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ZNF473Q8WTR7 871 aaKnown RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 PTPRN2Q92932 1015 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ARL8AQ96BM9 186 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 KLRG1Q96E93 195 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 GNGT2O14610 69 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.369e-11■□□□□ 11.3
PTPRK-203ENST00000368207 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 USP10Q14694 798 aaKnown RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ARSHQ5FYA8 562 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 FSCBQ5H9T9 825 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 AGBL2Q5U5Z8 902 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 SH3TC2Q8TF17 1288 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ANKZF1Q9H8Y5 726 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 C20orf96Q9NUD7 363 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ALDH7A1P49419 539 aaKnown RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 MFSD10Q14728 455 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 ANO4Q32M45 955 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 SLC27A1Q6PCB7 646 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 SPOCD1Q6ZMY3 1216 aa12.83□□□□□ -0.36
PTPRK-203ENST00000368207 EPS8L3Q8TE67 593 aaKnown RBP12.83□□□□□ -0.36
PTPRK-203ENST00000368207 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms