RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 TRIML1Q8N9V2 468 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 FAM200AQ8TCP9 573 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 GIPC2Q8TF65 315 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 ING5Q8WYH8 240 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 FGF14Q92915 247 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 PBXIP1Q96AQ6 731 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 TCEAL4Q96EI5 215 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 ASIC4Q96FT7 647 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 SYT15Q9BQS2 421 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 RPP25Q9BUL9 199 aaKnown RBP10.53□□□□□ -0.72
CD48-202ENST00000368046 NUMBLQ9Y6R0 609 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 ANK1P16157 1881 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 TRIM49BA6NDI0 452 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 BIN1O00499 593 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 HCRTO43612 131 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 ASS1P00966 412 aaKnown RBP10.52□□□□□ -0.73
CD48-202ENST00000368046 HLA-DRAP01903 254 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 TRIM49P0CI25 452 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 TRIM49CP0CI26 452 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 CSH1P0DML2 217 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 CSH2P0DML3 217 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 CEBPBP17676 345 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 ATF6P18850 670 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 MAGEA11P43364 429 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 DDR2Q16832 855 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 VSTM1Q6UX27 236 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 HFE2Q6ZVN8 426 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 TMC8Q8IU68 726 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 FAXDC2Q96IV6 333 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 LPIN3Q9BQK8 851 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 IMPG2Q9BZV3 1241 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 ATXN3LQ9H3M9 355 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 METTL14Q9HCE5 456 aaKnown RBP10.52□□□□□ -0.73
CD48-202ENST00000368046 TMEM8AQ9HCN3 771 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 CRTAC1Q9NQ79 661 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 LMBRD1Q9NUN5 540 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 WNT16Q9UBV4 365 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 ARMCX3Q9UH62 379 aaPredicted RBP10.52□□□□□ -0.73
CD48-202ENST00000368046 DUSP12Q9UNI6 340 aa10.52□□□□□ -0.73
CD48-202ENST00000368046 A0A1W2PRU2 124 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 BICDL2A1A5D9 508 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ECI2O75521 394 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 SRFP11831 508 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 HMGA1P17096 107 aaKnown RBP10.51□□□□□ -0.73
CD48-202ENST00000368046 GJA1P17302 382 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 GABRR2P28476 465 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 PIK3CAP42336 1068 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
CD48-202ENST00000368046 GPC5P78333 572 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 CYP27A1Q02318 531 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 FAM78AQ5JUQ0 283 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 TANGO2Q6ICL3 276 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 KLHL10Q6JEL2 608 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 Q6ZNB5 142 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 GAREM2Q75VX8 874 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 FRMD5Q7Z6J6 570 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 UNC93AQ86WB7 457 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 CRYBG2Q8N1P7 616 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 CCDC150Q8NCX0 1101 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 FBXL13Q8NEE6 735 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ST13P5Q8NFI4 369 aaPredicted RBP10.51□□□□□ -0.73
CD48-202ENST00000368046 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 GPR152Q8TDT2 470 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 TAS1R2Q8TE23 839 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 NELFBQ8WX92 580 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ELSPBP1Q96BH3 223 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ELMO3Q96BJ8 720 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 PCED1BQ96HM7 432 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 TNIP3Q96KP6 325 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 CEP295NLQ96MC4 621 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ZSWIM3Q96MP5 696 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 CEP63Q96MT8 703 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 GBP4Q96PP9 640 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 DUSP9Q99956 384 aaKnown RBP10.51□□□□□ -0.73
CD48-202ENST00000368046 SMOC2Q9H3U7 446 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 MMRN2Q9H8L6 949 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 CYP3A43Q9HB55 503 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ZFP14Q9HCL3 533 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 ZNF334Q9HCZ1 680 aaPredicted RBP10.51□□□□□ -0.73
CD48-202ENST00000368046 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 NME7Q9Y5B8 376 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 SCN1AP35498 2009 aa10.51□□□□□ -0.73
CD48-202ENST00000368046 SOBPA7XYQ1 873 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 NRG2O14511 850 aaPredicted RBP10.5□□□□□ -0.73
CD48-202ENST00000368046 NARSO43776 548 aaKnown RBP10.5□□□□□ -0.73
CD48-202ENST00000368046 CLSTN1O94985 981 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 F11P03951 625 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 BDNFP23560 247 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 WEE1P30291 646 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 CDC25CP30307 473 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 GRIK1P39086 918 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 TEAD2Q15562 447 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 ARHGAP15Q53QZ3 475 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 MDH1BQ5I0G3 518 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 WDR44Q5JSH3 913 aa10.5□□□□□ -0.73
CD48-202ENST00000368046 TCERG1LQ5VWI1 586 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms