RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ARIH1Q9Y4X5 557 aaPredicted RBP25.54■■□□□ 1.68
PFDN2-201ENST00000368010 SLC16A3O15427 465 aaKnown RBP25.53■■□□□ 1.68
PFDN2-201ENST00000368010 ASS1P00966 412 aaKnown RBP25.53■■□□□ 1.68
PFDN2-201ENST00000368010 HMGA1P17096 107 aaKnown RBP25.53■■□□□ 1.68
PFDN2-201ENST00000368010 AVPR2P30518 371 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 GTF2H1P32780 548 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 VCPP55072 806 aaKnown RBP25.53■■□□□ 1.68
PFDN2-201ENST00000368010 PFKPQ01813 784 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 MDH1BQ5I0G3 518 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 GPR158Q5T848 1215 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 SDHAF4Q5VUM1 108 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 VSTM1Q6UX27 236 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 ELMO3Q96BJ8 720 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 PLA2G2FQ9BZM2 168 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 KCNH6Q9H252 994 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 TRPV4Q9HBA0 871 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 TMEM8AQ9HCN3 771 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 ARHGEF3Q9NR81 526 aa25.53■■□□□ 1.68
PFDN2-201ENST00000368010 KRBA1A5PL33 1030 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 TRIM49BA6NDI0 452 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 PTPN1P18031 435 aaKnown RBP25.52■■□□□ 1.68
PFDN2-201ENST00000368010 CCNE1P24864 410 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 RAP1GAPP47736 663 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 CDH8P55286 799 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 STXBP5Q5T5C0 1151 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 ZC3H3Q8IXZ2 948 aaKnown RBP25.52■■□□□ 1.68
PFDN2-201ENST00000368010 B3GALNT2Q8NCR0 500 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 TAS1R2Q8TE23 839 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 DPEP3Q9H4B8 488 aa25.52■■□□□ 1.68
PFDN2-201ENST00000368010 MAGED2Q9UNF1 606 aaPredicted RBP25.52■■□□□ 1.68
PFDN2-201ENST00000368010 SLC38A8A6NNN8 435 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 STX10O60499 249 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 NOL4O94818 638 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 RFX1P22670 979 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 BDNFP23560 247 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 CLCN5P51795 746 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 MCCD1P59942 119 aaPredicted RBP25.51■■□□□ 1.67
PFDN2-201ENST00000368010 CYP4F8P98187 520 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 MORC3Q14149 939 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 CWF19L1Q69YN2 538 aaKnown RBP25.51■■□□□ 1.67
PFDN2-201ENST00000368010 KRT39Q6A163 491 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 ASTLQ6HA08 431 aaPredicted RBP25.51■■□□□ 1.67
PFDN2-201ENST00000368010 SPOPLQ6IQ16 392 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 CCDC150Q8NCX0 1101 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 STKLD1Q8NE28 680 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 DEPDC1BQ8WUY9 529 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 E2F7Q96AV8 911 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 SDCBP2Q9H190 292 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 TASP1Q9H6P5 420 aa25.51■■□□□ 1.67
PFDN2-201ENST00000368010 UXTQ9UBK9 157 aaPredicted RBP25.51■■□□□ 1.67
PFDN2-201ENST00000368010 BIN1O00499 593 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 CD44P16070 742 aaKnown RBP25.5■■□□□ 1.67
PFDN2-201ENST00000368010 NPR3P17342 541 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 GRIK1P39086 918 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 VIPR2P41587 438 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 MXI1P50539 228 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 NLRP12P59046 1061 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 GRM2Q14416 872 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 ZNF318Q5VUA4 2279 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 KLHL10Q6JEL2 608 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 TRMT2BQ96GJ1 504 aaKnown RBP25.5■■□□□ 1.67
PFDN2-201ENST00000368010 TNIP3Q96KP6 325 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 CEP295NLQ96MC4 621 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 TRMT61BQ9BVS5 477 aaKnown RBP25.5■■□□□ 1.67
PFDN2-201ENST00000368010 ELOVL4Q9GZR5 314 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 ZDBF2Q9HCK1 2354 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 ZMYM5Q9UJ78 669 aa25.5■■□□□ 1.67
PFDN2-201ENST00000368010 PSMC3P17980 439 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 BMP6P22004 513 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 ANXA13P27216 316 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 ASPAP45381 313 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 NOP14P78316 857 aaKnown RBP25.49■■□□□ 1.67
PFDN2-201ENST00000368010 DCAF17Q5H9S7 520 aaPredicted RBP25.49■■□□□ 1.67
PFDN2-201ENST00000368010 TCERG1LQ5VWI1 586 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 VITQ6UXI7 678 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 ARID3BQ8IVW6 561 aaPredicted RBP25.49■■□□□ 1.67
PFDN2-201ENST00000368010 SHDQ96IW2 340 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 SPATA17Q96L03 361 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 MYRFLQ96LU7 910 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 PRRX2Q99811 253 aa25.49■■□□□ 1.67
PFDN2-201ENST00000368010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.49■■□□□ 1.675e-8■■■■■ 138.3
PFDN2-201ENST00000368010 HEPACAM2A8MVW5 462 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 STK25O00506 426 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 TRIM66O15016 1216 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 F11P03951 625 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 TMEM150AQ86TG1 271 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 TMEM105Q8N8V8 129 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 TRIML1Q8N9V2 468 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 MRPS31Q92665 395 aaKnown RBP25.48■■□□□ 1.67
PFDN2-201ENST00000368010 NIF3L1Q9GZT8 377 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 BRD9Q9H8M2 597 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 TBC1D17Q9HA65 648 aa25.48■■□□□ 1.67
PFDN2-201ENST00000368010 ARMCX3Q9UH62 379 aaPredicted RBP25.48■■□□□ 1.67
PFDN2-201ENST00000368010 KMT2EQ8IZD2 1858 aa25.47■■□□□ 1.67
PFDN2-201ENST00000368010 ATP8B3O60423 1300 aa25.47■■□□□ 1.67
PFDN2-201ENST00000368010 BICDL2A1A5D9 508 aa25.47■■□□□ 1.67
PFDN2-201ENST00000368010 PPP1R3GB7ZBB8 358 aa25.47■■□□□ 1.67
PFDN2-201ENST00000368010 AOC1P19801 751 aa25.47■■□□□ 1.67
PFDN2-201ENST00000368010 DDX6P26196 483 aaKnown RBP eCLIP25.47■■□□□ 1.676e-7■■□□□ 12.2
PFDN2-201ENST00000368010 MLF2Q15773 248 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms