RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 TDRD3Q9H7E2 651 aaKnown RBP7.63□□□□□ -1.19
VTA1-202ENST00000367630 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 UBQLN1Q9UMX0 589 aaKnown RBP7.63□□□□□ -1.19
VTA1-202ENST00000367630 HUS1O60921 280 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 IRF5Q13568 498 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 FAM133BQ5BKY9 247 aaKnown RBP7.63□□□□□ -1.19
VTA1-202ENST00000367630 NAPEPLDQ6IQ20 393 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 CYP4F22Q6NT55 531 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 DPY19L2Q6NUT2 758 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 SWSAP1Q6NVH7 229 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 RNF34Q969K3 372 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 C12orf42Q96LP6 360 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 SRPK1Q96SB4 655 aaKnown RBP7.63□□□□□ -1.19
VTA1-202ENST00000367630 TRIM51Q9BSJ1 452 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 GOLPH3Q9H4A6 298 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 PCDHA2Q9Y5H9 948 aa7.63□□□□□ -1.19
VTA1-202ENST00000367630 CXCL11O14625 94 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 ATP6V1G2O95670 118 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 HSPA1AP0DMV8 641 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 HSPA1BP0DMV9 641 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 IFNAR2P48551 515 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 TBC1D1Q86TI0 1168 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 NDUFAF2Q8N183 169 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 SYTL5Q8TDW5 730 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 ASAP3Q8TDY4 903 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 PBXIP1Q96AQ6 731 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 CDK5RAP1Q96SZ6 601 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 PDCD2LQ9BRP1 358 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 FAM167BQ9BTA0 163 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 GRIN2DO15399 1336 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 ARHGAP42A6NI28 874 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 M0QYV0 167 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 OPHN1O60890 802 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 COBLO75128 1261 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 IL1BP01584 269 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 POLBP06746 335 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 KAZNQ674X7 775 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 METTL7BQ6UX53 244 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 MAEAQ7L5Y9 396 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 LZTR1Q8N653 840 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 EPS8L1Q8TE68 723 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 USP6NLQ92738 828 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 NKD2Q969F2 451 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 MED10Q9BTT4 135 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 TAGLN3Q9UI15 199 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 INO80B-WBP1J3KQ70 363 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 ANXA9O76027 345 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 HSPA4LO95757 839 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 FCGR1AP12314 374 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 SERPINB3P29508 390 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 NPY2RP49146 381 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 HIRAP54198 1017 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 GRTP1Q5TC63 336 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 NCAPG2Q86XI2 1143 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 ALLCQ8N6M5 410 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 NR1H4Q96RI1 486 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 NVLO15381 856 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 PDK4Q16654 411 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 AASDHQ4L235 1098 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 ATF7IP2Q5U623 682 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 EP400NLQ6ZTU2 488 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 TMPRSS6Q8IU80 811 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 GSPT2Q8IYD1 628 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 PPHLN1Q8NEY8 458 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 GSDMBQ8TAX9 411 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 CCDC124Q96CT7 223 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 MMP19Q99542 508 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 PORCNQ9H237 461 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 EPC1Q9H2F5 836 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 VTA1Q9NP79 307 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 RGL1Q9NZL6 768 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 XPO7Q9UIA9 1087 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 SIGLEC16A6NMB1 481 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 STRNO43815 780 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 CLASP2O75122 1294 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 PLEKP08567 350 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 SPATA31C1P0DKV0 1188 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 DRD4P21917 467 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 BACE1P56817 501 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 STX3Q13277 289 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 CHSY1Q86X52 802 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 TTC8Q8TAM2 541 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 ZFRQ96KR1 1074 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 MAGEB10Q96LZ2 347 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 NPHP3-ACAD11A0A0J9YXS1 232 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 GPC4O75487 556 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 HARSP12081 509 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 PTK7Q13308 1070 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 SYCP2LQ5T4T6 812 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 NET1Q7Z628 596 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 USP13Q92995 863 aaPredicted RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 ARL8AQ96BM9 186 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 UBE2OQ9C0C9 1292 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 MUC13Q9H3R2 512 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 RAVER2Q9HCJ3 691 aaKnown RBP7.62□□□□□ -1.19
VTA1-202ENST00000367630 SSC5DA1L4H1 1573 aa7.62□□□□□ -1.19
VTA1-202ENST00000367630 NOL4O94818 638 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms