RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SLC35G2Q8TBE7 412 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 RFFLQ8WZ73 363 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 ZNF592Q92610 1267 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 HEXIM2Q96MH2 286 aaKnown RBP10.08□□□□□ -0.8
VTA1-201ENST00000367621 UROC1Q96N76 676 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 NOX5Q96PH1 765 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 RTP3Q9BQQ7 232 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 CHORDC1Q9UHD1 332 aaPredicted RBP10.08□□□□□ -0.8
VTA1-201ENST00000367621 GTF3C4Q9UKN8 822 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 KIAA1257Q9ULG3 409 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
VTA1-201ENST00000367621 STXBP5LQ9Y2K9 1186 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 PCDHB7Q9Y5E2 793 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 A8MXQ7 604 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 I3L4J1 428 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 HUS1O60921 280 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 PALMO75781 387 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 KIF4AO95239 1232 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 ATP1A1P05023 1023 aaKnown RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 CYP11A1P05108 521 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 PDGFRBP09619 1106 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 CD19P15391 556 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 CSF2RAP15509 400 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 MMP8P22894 467 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 CASQ1P31415 396 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 GPD2P43304 727 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 BRCC3P46736 316 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 HADHBP55084 474 aaKnown RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 CCDC142Q17RM4 750 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 C2CD6Q53TS8 623 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 SGO2Q562F6 1265 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 PPP1R26Q5T8A7 1209 aaPredicted RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 MFSD5Q6N075 450 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 C16orf59Q7L2K0 433 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 NPAS4Q8IUM7 802 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 ADGRF2Q8IZF7 708 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 C1orf131Q8NDD1 294 aaKnown RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 OR6B3Q8NGW1 331 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 ZNF518BQ9C0D4 1074 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 NRDE2Q9H7Z3 1164 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 L2HGDHQ9H9P8 463 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 ABCB6Q9NP58 842 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 OSGEPQ9NPF4 335 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 DNAJB4Q9UDY4 337 aa10.07□□□□□ -0.8
VTA1-201ENST00000367621 TIMM13Q9Y5L4 95 aaPredicted RBP10.07□□□□□ -0.8
VTA1-201ENST00000367621 TMEM189-UBE2V1I3L0A0 370 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 MED7O43513 233 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 ATP2C2O75185 946 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 B3GAT3O94766 335 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 PAX3P23760 479 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 RRM1P23921 792 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 FOXC1Q12948 553 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 PTPN20Q4JDL3 420 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 PAN2Q504Q3 1202 aaKnown RBP10.06□□□□□ -0.8
VTA1-201ENST00000367621 DNTTIP2Q5QJE6 756 aaKnown RBP10.06□□□□□ -0.8
VTA1-201ENST00000367621 PLEKHA7Q6IQ23 1121 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 MMS22LQ6ZRQ5 1243 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 PAQR9Q6ZVX9 377 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 TTC30AQ86WT1 665 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 TMEM86AQ8N2M4 240 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 TMEM35BQ8NCS4 154 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 TRIM58Q8NG06 486 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 URGCPQ8TCY9 931 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 CTNNBL1Q8WYA6 563 aaPredicted RBP10.06□□□□□ -0.8
VTA1-201ENST00000367621 RSPH1Q8WYR4 309 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 VCPIP1Q96JH7 1222 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 PKMYT1Q99640 499 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 NAPGQ99747 312 aaPredicted RBP10.06□□□□□ -0.8
VTA1-201ENST00000367621 TLR10Q9BXR5 811 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 SNX25Q9H3E2 840 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 GOLPH3Q9H4A6 298 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 RC3H2Q9HBD1 1191 aaKnown RBP10.06□□□□□ -0.8
VTA1-201ENST00000367621 CRTAC1Q9NQ79 661 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 MARCH5Q9NX47 278 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 TJP2Q9UDY2 1190 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 CNOT8Q9UFF9 292 aaKnown RBP10.06□□□□□ -0.8
VTA1-201ENST00000367621 TSPAN16Q9UKR8 245 aa10.06□□□□□ -0.8
VTA1-201ENST00000367621 ABHD14A-ACY1A0A1B0GW23 586 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 CTAGE9A4FU28 777 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 TULP2O00295 520 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 ENC1O14682 589 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 NCK2O43639 380 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 BUB1BO60566 1050 aaPredicted RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 DGKIO75912 1065 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 EFEMP2O95967 443 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 MYBL1P10243 752 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 CCDC130P13994 396 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 TYMPP19971 482 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 ACAT1P24752 427 aaKnown RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 TKTP29401 623 aaKnown RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 NSFP46459 744 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms