RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CST5P28325 142 aaPredicted RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CYP2C18P33260 490 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 SLC1A4P43007 532 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CDK7P50613 346 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 KCNQ1P51787 676 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 STAT2P52630 851 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 OAZ1P54368 228 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 RRADP55042 308 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 ADAM17P78536 824 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CD83Q01151 205 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 TNFAIP2Q03169 654 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 PPARAQ07869 468 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 PPIGQ13427 754 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 MUM1L1Q5H9M0 696 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 TMEM240Q5SV17 173 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 MFSD5Q6N075 450 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CCDC174Q6PII3 467 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CXCL17Q6UXB2 119 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CCDC129Q6ZRS4 1044 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 LIMS2Q7Z4I7 341 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 RTN4RL1Q86UN2 441 aaPredicted RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 KIF18BQ86Y91 864 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 FAM133AQ8N9E0 248 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 PPM1EQ8WY54 764 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 ERCC4Q92889 916 aaPredicted RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 TIFAQ96CG3 184 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 FSD1Q9BTV5 496 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 NACAP1Q9BZK3 213 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 NAPBQ9H115 298 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 UPF3AQ9H1J1 476 aaKnown RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 ACAD9Q9H845 621 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 A1CFQ9NQ94 594 aaKnown RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 STX8Q9UNK0 236 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 MYO9BQ13459 2157 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 VCANP13611 3396 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 PLIN4Q96Q06 1357 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 UMODL1Q5DID0 1318 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 TSPY2A6NKD2 308 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 PRLP01236 227 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 SLC3A2P08195 630 aaKnown RBP6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 EPHA7Q15375 998 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 FSCN1Q16658 493 aaKnown RBP6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 CCDC96Q2M329 555 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 TKFCQ3LXA3 575 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 TMEM63BQ5T3F8 832 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 AGBL4Q5VU57 503 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 DBX2Q6ZNG2 339 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 ZNF365Q70YC5 407 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 TLK2Q86UE8 772 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 FAM160B2Q86V87 743 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 LRRTM3Q86VH5 581 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 FBXO16Q8IX29 292 aaPredicted RBP6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 TMEM199Q8N511 208 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 CHURC1Q8WUH1 139 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 STAG1Q8WVM7 1258 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 FOXRED1Q96CU9 486 aaPredicted RBP6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 MFSD3Q96ES6 412 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 C8orf49Q96NF6 230 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 LRRC37BQ96QE4 947 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 CDK5RAP1Q96SZ6 601 aaKnown RBP6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 C1QTNF3Q9BXJ4 246 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 PRDM12Q9H4Q4 367 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 PDGFCQ9NRA1 345 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 IL17RBQ9NRM6 502 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
RNU4-4P-201ENST00000364588 GRIN2DO15399 1336 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 TTC41PQ6P2S7 1318 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 ASB14A6NK59 587 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 ENPP3O14638 875 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 ERC2O15083 957 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 GPR42O15529 346 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 ARHGAP6O43182 974 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 RANBP6O60518 1105 aaKnown RBP6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 KPNA6O60684 536 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 CD4P01730 458 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 MX1P20591 662 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 SLC16A2P36021 539 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 SELENOPP49908 381 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 NEK4P51957 841 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 CCL23P55773 120 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 PSMC6P62333 389 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 NFKB2Q00653 900 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 ITGA7Q13683 1181 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 NFYCQ13952 458 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 TTC38Q5R3I4 469 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 VPS53Q5VIR6 699 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 SLFN12LQ6IEE8 588 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 PSRC1Q6PGN9 363 aaPredicted RBP6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 ZZZ3Q8IYH5 903 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 GIMAP8Q8ND71 665 aaPredicted RBP6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 DNERQ8NFT8 737 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 DVL3Q92997 716 aaPredicted RBP6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 NEIL1Q96FI4 390 aaPredicted RBP6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 GPR20Q99678 358 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 TRPV6Q9H1D0 765 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 OR10A2Q9H208 303 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 HIPK3Q9H422 1215 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 IL23AQ9NPF7 189 aa6.06□□□□□ -1.44
RNU4-4P-201ENST00000364588 TOMM22Q9NS69 142 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms